Mirheo
stable
User guide
Overview
Installation
Testing
Tutorials
Benchmarks
Mirheo coordinator
Particle Vectors
Initial conditions
Object belonging checkers
Integrators
Interactions
Object bouncers
Walls
Plugins
Utils
Developer guide
Overview
Coding Conventions
Library API
Mirheo
Docs
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Index
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Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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O
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P
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R
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S
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T
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U
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V
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W
_
__init__() (BelongingChecker method)
(Bouncer method)
(Box method)
(Capsule method)
,
[1]
(ChainFENE method)
(ChainVector method)
(Cylinder method)
,
[1]
,
[2]
(DataManager method)
(Ellipsoid method)
,
[1]
(FromArray method)
(InitialConditions method)
(Integrator method)
(Interaction method)
(LocalObjectVector method)
(LocalParticleVector method)
(Membrane method)
(MembraneForces method)
(MembraneMesh method)
(MembraneVector method)
(MembraneWithTypeId method)
(Mesh method)
,
[1]
,
[2]
(Minimize method)
(Mirheo method)
(MovingPlane method)
(ObjBinding method)
(ObjRodBinding method)
(ObjectVector method)
(Oscillate method)
(OscillatingPlane method)
(Pairwise method)
(ParticleVector method)
(Plane method)
(RandomChains method)
(Restart method)
(Rigid method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RigidVelocityVerlet method)
(Rod method)
,
[1]
,
[2]
(RodForces method)
(RodVector method)
(Rotate method)
(RotatingCylinder method)
(SDF method)
(Sphere method)
(StraightChains method)
(SubStep method)
(SubStepShardlowSweep method)
(Translate method)
(Uniform method)
(UniformFiltered method)
(UniformSphere method)
(VelocityVerlet method)
(VelocityVerlet_withConstForce method)
(VelocityVerlet_withPeriodicForce method)
(Wall method)
A
applyObjectBelongingChecker() (Mirheo method)
attachFrozenParticles() (Box method)
(Cylinder method)
(MovingPlane method)
(OscillatingPlane method)
(Plane method)
(RotatingCylinder method)
(SDF method)
(Sphere method)
(Wall method)
B
BelongingChecker (class in mmirheo.BelongingCheckers)
Bouncer (class in mmirheo.Bouncers)
Box (class in mmirheo.Walls)
C
Capsule (class in mmirheo.BelongingCheckers)
(class in mmirheo.Bouncers)
ChainFENE (class in mmirheo.Interactions)
ChainVector (class in mmirheo.ParticleVectors)
computeVolumeInsideWalls() (Mirheo method)
createAddForce() (in module mmirheo.Plugins)
createAddFourRollMillForce() (in module mmirheo.Plugins)
createAddTorque() (in module mmirheo.Plugins)
createAnchorParticles() (in module mmirheo.Plugins)
createBerendsenThermostat() (in module mmirheo.Plugins)
createDensityControl() (in module mmirheo.Plugins)
createDensityOutlet() (in module mmirheo.Plugins)
createDumpAverage() (in module mmirheo.Plugins)
createDumpAverageRelative() (in module mmirheo.Plugins)
createDumpMesh() (in module mmirheo.Plugins)
createDumpObjectStats() (in module mmirheo.Plugins)
createDumpParticles() (in module mmirheo.Plugins)
createDumpParticlesWithMesh() (in module mmirheo.Plugins)
createDumpParticlesWithPolylines() (in module mmirheo.Plugins)
createDumpXYZ() (in module mmirheo.Plugins)
createExchangePVSFluxPlane() (in module mmirheo.Plugins)
createExternalMagneticTorque() (in module mmirheo.Plugins)
createForceSaver() (in module mmirheo.Plugins)
createImposeProfile() (in module mmirheo.Plugins)
createImposeVelocity() (in module mmirheo.Plugins)
createMagneticDipoleInteractions() (in module mmirheo.Plugins)
createMembraneExtraForce() (in module mmirheo.Plugins)
createMsd() (in module mmirheo.Plugins)
createParticleChannelAverager() (in module mmirheo.Plugins)
createParticleChannelSaver() (in module mmirheo.Plugins)
createParticleChecker() (in module mmirheo.Plugins)
createParticleDisplacement() (in module mmirheo.Plugins)
createParticleDrag() (in module mmirheo.Plugins)
createPinObject() (in module mmirheo.Plugins)
createPinRodExtremity() (in module mmirheo.Plugins)
createPlaneOutlet() (in module mmirheo.Plugins)
createRateOutlet() (in module mmirheo.Plugins)
createRdf() (in module mmirheo.Plugins)
createStats() (in module mmirheo.Plugins)
createTemperaturize() (in module mmirheo.Plugins)
createVacf() (in module mmirheo.Plugins)
createVelocityControl() (in module mmirheo.Plugins)
createVelocityInlet() (in module mmirheo.Plugins)
createVirialPressurePlugin() (in module mmirheo.Plugins)
createWallForceCollector() (in module mmirheo.Plugins)
createWallRepulsion() (in module mmirheo.Plugins)
current_dt (MirState attribute)
current_step (MirState attribute)
current_time (MirState attribute)
Cylinder (class in mmirheo.BelongingCheckers)
(class in mmirheo.Bouncers)
(class in mmirheo.Walls)
D
DataManager (class in mmirheo.ParticleVectors)
deregisterIntegrator() (Mirheo method)
deregisterPlugins() (Mirheo method)
domain_info (MirState attribute)
DomainInfo (class in mmirheo)
dumpWalls2XDMF() (Mirheo method)
E
Ellipsoid (class in mmirheo.BelongingCheckers)
(class in mmirheo.Bouncers)
F
FromArray (class in mmirheo.InitialConditions)
G
get_all_compile_options() (in module mmirheo.Utils)
get_compile_option() (in module mmirheo.Utils)
get_indices() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
getCoordinates() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
getFaces() (MembraneMesh method)
(Mesh method)
getForces() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
getReservedBisegmentChannels() (in module mmirheo.ParticleVectors)
getReservedObjectChannels() (in module mmirheo.ParticleVectors)
getReservedParticleChannels() (in module mmirheo.ParticleVectors)
getState() (Mirheo method)
getVelocities() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
getVertices() (MembraneMesh method)
(Mesh method)
global_size (DomainInfo attribute)
global_start (DomainInfo attribute)
global_to_local() (DomainInfo method)
global_to_local_shift (DomainInfo attribute)
H
halo (ChainVector attribute)
(MembraneVector attribute)
(ObjectVector attribute)
(ParticleVector attribute)
(RigidCapsuleVector attribute)
(RigidCylinderVector attribute)
(RigidEllipsoidVector attribute)
(RigidObjectVector attribute)
(RodVector attribute)
I
InitialConditions (class in mmirheo.InitialConditions)
Integrator (class in mmirheo.Integrators)
Interaction (class in mmirheo.Interactions)
is_in_subdomain() (DomainInfo method)
isComputeTask() (Mirheo method)
isMasterTask() (Mirheo method)
L
local (ChainVector attribute)
(MembraneVector attribute)
(ObjectVector attribute)
(ParticleVector attribute)
(RigidCapsuleVector attribute)
(RigidCylinderVector attribute)
(RigidEllipsoidVector attribute)
(RigidObjectVector attribute)
(RodVector attribute)
local_size (DomainInfo attribute)
local_to_global() (DomainInfo method)
local_to_global_shift (DomainInfo attribute)
LocalObjectVector (class in mmirheo.ParticleVectors)
LocalParticleVector (class in mmirheo.ParticleVectors)
log_compile_options() (Mirheo method)
M
makeFrozenRigidParticles() (Mirheo method)
makeFrozenWallParticles() (Mirheo method)
Membrane (class in mmirheo.InitialConditions)
MembraneForces (class in mmirheo.Interactions)
MembraneMesh (class in mmirheo.ParticleVectors)
MembraneVector (class in mmirheo.ParticleVectors)
MembraneWithTypeId (class in mmirheo.InitialConditions)
Mesh (class in mmirheo.BelongingCheckers)
(class in mmirheo.Bouncers)
(class in mmirheo.ParticleVectors)
Minimize (class in mmirheo.Integrators)
mirheo (C++ type)
Mirheo (class in mmirheo)
mirheo::AddForcePlugin (C++ class)
mirheo::AddForcePlugin::AddForcePlugin (C++ function)
mirheo::AddForcePlugin::beforeForces (C++ function)
mirheo::AddForcePlugin::needPostproc (C++ function)
mirheo::AddForcePlugin::setup (C++ function)
mirheo::AddTorquePlugin (C++ class)
mirheo::AddTorquePlugin::AddTorquePlugin (C++ function)
mirheo::AddTorquePlugin::beforeForces (C++ function)
mirheo::AddTorquePlugin::needPostproc (C++ function)
mirheo::AddTorquePlugin::setup (C++ function)
mirheo::AnchorParticlesPlugin (C++ class)
mirheo::AnchorParticlesPlugin::afterIntegration (C++ function)
mirheo::AnchorParticlesPlugin::AnchorParticlesPlugin (C++ function)
mirheo::AnchorParticlesPlugin::handshake (C++ function)
mirheo::AnchorParticlesPlugin::needPostproc (C++ function)
mirheo::AnchorParticlesPlugin::serializeAndSend (C++ function)
mirheo::AnchorParticlesPlugin::setup (C++ function)
mirheo::AnchorParticlesStatsPlugin (C++ class)
mirheo::AnchorParticlesStatsPlugin::AnchorParticlesStatsPlugin (C++ function)
mirheo::AnchorParticlesStatsPlugin::deserialize (C++ function)
mirheo::AnchorParticlesStatsPlugin::handshake (C++ function)
mirheo::AnchorParticlesStatsPlugin::setup (C++ function)
mirheo::Average3D (C++ class)
mirheo::Average3D::afterIntegration (C++ function)
mirheo::Average3D::Average3D (C++ function)
mirheo::Average3D::ChannelType (C++ type)
mirheo::Average3D::handshake (C++ function)
mirheo::Average3D::HostChannelsInfo (C++ class)
mirheo::Average3D::HostChannelsInfo::average (C++ member)
mirheo::Average3D::HostChannelsInfo::averagePtrs (C++ member)
mirheo::Average3D::HostChannelsInfo::dataPtrs (C++ member)
mirheo::Average3D::HostChannelsInfo::n (C++ member)
mirheo::Average3D::HostChannelsInfo::names (C++ member)
mirheo::Average3D::HostChannelsInfo::types (C++ member)
mirheo::Average3D::needPostproc (C++ function)
mirheo::Average3D::None (C++ enumerator)
mirheo::Average3D::Scalar (C++ enumerator)
mirheo::Average3D::serializeAndSend (C++ function)
mirheo::Average3D::setup (C++ function)
mirheo::Average3D::Tensor6 (C++ enumerator)
mirheo::Average3D::Vector_real3 (C++ enumerator)
mirheo::Average3D::Vector_real4 (C++ enumerator)
mirheo::AverageRelative3D (C++ class)
mirheo::AverageRelative3D::afterIntegration (C++ function)
mirheo::AverageRelative3D::AverageRelative3D (C++ function)
mirheo::AverageRelative3D::needPostproc (C++ function)
mirheo::AverageRelative3D::serializeAndSend (C++ function)
mirheo::AverageRelative3D::setup (C++ function)
mirheo::BaseMembraneInteraction (C++ class)
mirheo::BaseMembraneInteraction::BaseMembraneInteraction (C++ function)
mirheo::BaseMembraneInteraction::halo (C++ function)
mirheo::BaseMembraneInteraction::isSelfObjectInteraction (C++ function)
mirheo::BaseMembraneInteraction::setPrerequisites (C++ function)
mirheo::BasePairwiseInteraction (C++ class)
mirheo::BasePairwiseInteraction::BasePairwiseInteraction (C++ function)
mirheo::BasePairwiseInteraction::getCutoffRadius (C++ function)
mirheo::BaseRodInteraction (C++ class)
mirheo::BaseRodInteraction::BaseRodInteraction (C++ function)
mirheo::BaseRodInteraction::halo (C++ function)
mirheo::BaseRodInteraction::isSelfObjectInteraction (C++ function)
mirheo::BerendsenThermostatPlugin (C++ class)
mirheo::BerendsenThermostatPlugin::afterIntegration (C++ function)
mirheo::BerendsenThermostatPlugin::BerendsenThermostatPlugin (C++ function)
mirheo::BerendsenThermostatPlugin::needPostproc (C++ function)
mirheo::BerendsenThermostatPlugin::setup (C++ function)
mirheo::BiSegment (C++ class)
mirheo::BiSegment::applyGrad0Bicur (C++ function)
mirheo::BiSegment::applyGrad2Bicur (C++ function)
mirheo::BiSegment::bicur (C++ member)
mirheo::BiSegment::bicurFactor (C++ member)
mirheo::BiSegment::BiSegment (C++ function)
mirheo::BiSegment::computeBendingForces (C++ function)
mirheo::BiSegment::computeCurvatures (C++ function)
mirheo::BiSegment::computeCurvaturesGradients (C++ function)
mirheo::BiSegment::computeEnergy (C++ function)
mirheo::BiSegment::computeTorsion (C++ function)
mirheo::BiSegment::computeTorsionGradients (C++ function)
mirheo::BiSegment::computeTwistForces (C++ function)
mirheo::BiSegment::dp0 (C++ member)
mirheo::BiSegment::dp1 (C++ member)
mirheo::BiSegment::e0 (C++ member)
mirheo::BiSegment::e0inv (C++ member)
mirheo::BiSegment::e1 (C++ member)
mirheo::BiSegment::e1inv (C++ member)
mirheo::BiSegment::l (C++ member)
mirheo::BiSegment::linv (C++ member)
mirheo::BiSegment::t0 (C++ member)
mirheo::BiSegment::t1 (C++ member)
mirheo::BounceBack (C++ class)
mirheo::BounceBack::newVelocity (C++ function)
mirheo::BounceBack::update (C++ function)
mirheo::BounceFromMesh (C++ class)
mirheo::BounceFromMesh::BounceFromMesh (C++ function)
mirheo::BounceFromMesh::getChannelsToBeExchanged (C++ function)
mirheo::BounceFromMesh::getChannelsToBeSentBack (C++ function)
mirheo::BounceFromMesh::setPrerequisites (C++ function)
mirheo::BounceFromMesh::setup (C++ function)
mirheo::BounceFromRigidShape (C++ class)
mirheo::BounceFromRigidShape::BounceFromRigidShape (C++ function)
mirheo::BounceFromRigidShape::getChannelsToBeExchanged (C++ function)
mirheo::BounceFromRigidShape::getChannelsToBeSentBack (C++ function)
mirheo::BounceFromRigidShape::setPrerequisites (C++ function)
mirheo::BounceFromRigidShape::setup (C++ function)
mirheo::BounceFromRod (C++ class)
mirheo::BounceFromRod::BounceFromRod (C++ function)
mirheo::BounceFromRod::getChannelsToBeExchanged (C++ function)
mirheo::BounceFromRod::getChannelsToBeSentBack (C++ function)
mirheo::BounceFromRod::setPrerequisites (C++ function)
mirheo::BounceFromRod::setup (C++ function)
mirheo::BounceMaxwell (C++ class)
mirheo::BounceMaxwell::BounceMaxwell (C++ function)
mirheo::BounceMaxwell::newVelocity (C++ function)
mirheo::BounceMaxwell::update (C++ function)
mirheo::Bouncer (C++ class)
mirheo::Bouncer::bounceHalo (C++ function)
mirheo::Bouncer::bounceLocal (C++ function)
mirheo::Bouncer::Bouncer (C++ function)
mirheo::Bouncer::getChannelsToBeExchanged (C++ function)
mirheo::Bouncer::getChannelsToBeSentBack (C++ function)
mirheo::Bouncer::getObjectVector (C++ function)
mirheo::Bouncer::setPrerequisites (C++ function)
mirheo::Bouncer::setup (C++ function)
mirheo::BufferInfos (C++ class)
mirheo::BufferInfos::buffer (C++ member)
mirheo::BufferInfos::clearAllSizes (C++ function)
mirheo::BufferInfos::getBufferDevPtr (C++ function)
mirheo::BufferInfos::offsets (C++ member)
mirheo::BufferInfos::offsetsBytes (C++ member)
mirheo::BufferInfos::requests (C++ member)
mirheo::BufferInfos::resizeInfos (C++ function)
mirheo::BufferInfos::sizes (C++ member)
mirheo::BufferInfos::sizesBytes (C++ member)
mirheo::BufferInfos::uploadInfosToDevice (C++ function)
mirheo::BufferOffsetsSizesWrap (C++ class)
mirheo::BufferOffsetsSizesWrap::buffer (C++ member)
mirheo::BufferOffsetsSizesWrap::getBuffer (C++ function)
mirheo::BufferOffsetsSizesWrap::nBuffers (C++ member)
mirheo::BufferOffsetsSizesWrap::offsets (C++ member)
mirheo::BufferOffsetsSizesWrap::offsetsBytes (C++ member)
mirheo::BufferOffsetsSizesWrap::sizes (C++ member)
mirheo::Capsule (C++ class)
mirheo::Capsule::Capsule (C++ function)
mirheo::Capsule::desc (C++ member)
mirheo::Capsule::inertiaTensor (C++ function)
mirheo::Capsule::inOutFunction (C++ function)
mirheo::Capsule::normal (C++ function)
mirheo::CellList (C++ class)
mirheo::CellList::accumulateChannels (C++ function)
mirheo::CellList::build (C++ function)
mirheo::CellList::cellInfo (C++ function)
mirheo::CellList::CellList (C++ function)
,
[1]
mirheo::CellList::clearChannels (C++ function)
mirheo::CellList::gatherChannels (C++ function)
mirheo::CellList::getLocalParticleVector (C++ function)
mirheo::CellList::getName (C++ function)
mirheo::CellList::getView (C++ function)
mirheo::CellList::requireExtraDataPerParticle (C++ function)
mirheo::CellListInfo (C++ class)
mirheo::CellListInfo::CellListInfo (C++ function)
,
[1]
mirheo::CellListInfo::cellSizes (C++ member)
mirheo::CellListInfo::cellStarts (C++ member)
mirheo::CellListInfo::decode (C++ function)
,
[1]
mirheo::CellListInfo::encode (C++ function)
,
[1]
mirheo::CellListInfo::getCellId (C++ function)
mirheo::CellListInfo::getCellIdAlongAxes (C++ function)
mirheo::CellListInfo::h (C++ member)
mirheo::CellListInfo::localDomainSize (C++ member)
mirheo::CellListInfo::ncells (C++ member)
mirheo::CellListInfo::order (C++ member)
mirheo::CellListInfo::rc (C++ member)
mirheo::CellListInfo::totcells (C++ member)
mirheo::COMandExtent (C++ class)
mirheo::COMandExtent::com (C++ member)
mirheo::COMandExtent::high (C++ member)
mirheo::COMandExtent::low (C++ member)
mirheo::computeGradient (C++ function)
mirheo::ComQ (C++ class)
mirheo::ComQ::q (C++ member)
mirheo::ComQ::r (C++ member)
mirheo::createDomainInfo (C++ function)
mirheo::createFoldersCollective (C++ function)
mirheo::createStrZeroPadded (C++ function)
mirheo::Cylinder (C++ class)
mirheo::Cylinder::Cylinder (C++ function)
mirheo::Cylinder::desc (C++ member)
mirheo::Cylinder::inertiaTensor (C++ function)
mirheo::Cylinder::inOutFunction (C++ function)
mirheo::Cylinder::normal (C++ function)
mirheo::DataManager (C++ class)
mirheo::DataManager::ChannelDescription (C++ class)
mirheo::DataManager::ChannelDescription::container (C++ member)
mirheo::DataManager::ChannelDescription::needShift (C++ function)
mirheo::DataManager::ChannelDescription::persistence (C++ member)
mirheo::DataManager::ChannelDescription::shift (C++ member)
mirheo::DataManager::ChannelDescription::varDataPtr (C++ member)
mirheo::DataManager::checkChannelExists (C++ function)
mirheo::DataManager::checkPersistence (C++ function)
mirheo::DataManager::copyChannelMap (C++ function)
mirheo::DataManager::createData (C++ function)
mirheo::DataManager::DataManager (C++ function)
mirheo::DataManager::getChannelDesc (C++ function)
mirheo::DataManager::getChannelDescOrDie (C++ function)
mirheo::DataManager::getData (C++ function)
mirheo::DataManager::getGenericData (C++ function)
mirheo::DataManager::getGenericPtr (C++ function)
mirheo::DataManager::getSortedChannels (C++ function)
mirheo::DataManager::NamedChannelDesc (C++ type)
mirheo::DataManager::resize (C++ function)
mirheo::DataManager::resize_anew (C++ function)
mirheo::DataManager::setPersistenceMode (C++ function)
mirheo::DataManager::setShiftMode (C++ function)
mirheo::DataTypeWrapper (C++ class)
mirheo::DensityAccumulator (C++ class)
mirheo::DensityAccumulator::add (C++ function)
mirheo::DensityAccumulator::atomicAddToDst (C++ function)
mirheo::DensityAccumulator::atomicAddToSrc (C++ function)
mirheo::DensityAccumulator::DensityAccumulator (C++ function)
mirheo::DensityAccumulator::get (C++ function)
mirheo::DensityControlPlugin (C++ class)
mirheo::DensityControlPlugin::beforeForces (C++ function)
mirheo::DensityControlPlugin::checkpoint (C++ function)
mirheo::DensityControlPlugin::DensityControlPlugin (C++ function)
mirheo::DensityControlPlugin::LevelBounds (C++ class)
mirheo::DensityControlPlugin::LevelBounds::hi (C++ member)
mirheo::DensityControlPlugin::LevelBounds::lo (C++ member)
mirheo::DensityControlPlugin::LevelBounds::space (C++ member)
mirheo::DensityControlPlugin::needPostproc (C++ function)
mirheo::DensityControlPlugin::RegionFunc (C++ type)
mirheo::DensityControlPlugin::restart (C++ function)
mirheo::DensityControlPlugin::serializeAndSend (C++ function)
mirheo::DensityControlPlugin::setup (C++ function)
mirheo::DensityOutletPlugin (C++ class)
mirheo::DensityOutletPlugin::beforeCellLists (C++ function)
mirheo::DensityOutletPlugin::DensityOutletPlugin (C++ function)
mirheo::DeviceBuffer (C++ class)
mirheo::DeviceBuffer::clear (C++ function)
mirheo::DeviceBuffer::clearDevice (C++ function)
mirheo::DeviceBuffer::copy (C++ function)
,
[1]
mirheo::DeviceBuffer::copyFromDevice (C++ function)
mirheo::DeviceBuffer::copyFromHost (C++ function)
mirheo::DeviceBuffer::datatype_size (C++ function)
mirheo::DeviceBuffer::DeviceBuffer (C++ function)
,
[1]
,
[2]
mirheo::DeviceBuffer::devPtr (C++ function)
mirheo::DeviceBuffer::genericDevPtr (C++ function)
mirheo::DeviceBuffer::operator= (C++ function)
,
[1]
mirheo::DeviceBuffer::produce (C++ function)
mirheo::DeviceBuffer::resize (C++ function)
mirheo::DeviceBuffer::resize_anew (C++ function)
mirheo::DeviceBuffer::size (C++ function)
mirheo::DihedralJuelicher (C++ class)
mirheo::DihedralJuelicher::applyLengthScalingFactor (C++ function)
mirheo::DihedralJuelicher::computeInternalCommonQuantities (C++ function)
mirheo::DihedralJuelicher::DihedralJuelicher (C++ function)
mirheo::DihedralJuelicher::operator() (C++ function)
mirheo::DihedralJuelicher::ParametersType (C++ type)
mirheo::DihedralKantor (C++ class)
mirheo::DihedralKantor::applyLengthScalingFactor (C++ function)
mirheo::DihedralKantor::computeInternalCommonQuantities (C++ function)
mirheo::DihedralKantor::DihedralKantor (C++ function)
mirheo::DihedralKantor::operator() (C++ function)
mirheo::DihedralKantor::ParametersType (C++ type)
mirheo::DomainInfo (C++ class)
mirheo::DomainInfo::global2local (C++ function)
mirheo::DomainInfo::globalSize (C++ member)
mirheo::DomainInfo::globalStart (C++ member)
mirheo::DomainInfo::inSubDomain (C++ function)
mirheo::DomainInfo::local2global (C++ function)
mirheo::DomainInfo::localSize (C++ member)
mirheo::Ellipsoid (C++ class)
mirheo::Ellipsoid::desc (C++ member)
mirheo::Ellipsoid::Ellipsoid (C++ function)
mirheo::Ellipsoid::inertiaTensor (C++ function)
mirheo::Ellipsoid::inOutFunction (C++ function)
mirheo::Ellipsoid::normal (C++ function)
mirheo::ExchangeEngine (C++ class)
mirheo::ExchangeEngine::ExchangeEngine (C++ function)
mirheo::ExchangeEngine::finalize (C++ function)
mirheo::ExchangeEngine::init (C++ function)
mirheo::ExchangeEntity (C++ class)
mirheo::ExchangeEntity::bulkId (C++ member)
mirheo::ExchangeEntity::computeRecvOffsets (C++ function)
mirheo::ExchangeEntity::computeSendOffsets (C++ function)
mirheo::ExchangeEntity::computeSendOffsets_Dev2Dev (C++ function)
mirheo::ExchangeEntity::ExchangeEntity (C++ function)
mirheo::ExchangeEntity::getCName (C++ function)
mirheo::ExchangeEntity::getName (C++ function)
mirheo::ExchangeEntity::getUniqueId (C++ function)
mirheo::ExchangeEntity::nBuffers (C++ member)
mirheo::ExchangeEntity::recv (C++ member)
mirheo::ExchangeEntity::recvRequestIdxs (C++ member)
mirheo::ExchangeEntity::resizeRecvBuf (C++ function)
mirheo::ExchangeEntity::resizeSendBuf (C++ function)
mirheo::ExchangeEntity::send (C++ member)
mirheo::ExchangeEntity::wrapRecvData (C++ function)
mirheo::ExchangeEntity::wrapSendData (C++ function)
mirheo::ExchangePVSFluxPlanePlugin (C++ class)
mirheo::ExchangePVSFluxPlanePlugin::beforeCellLists (C++ function)
mirheo::ExchangePVSFluxPlanePlugin::ExchangePVSFluxPlanePlugin (C++ function)
mirheo::ExchangePVSFluxPlanePlugin::needPostproc (C++ function)
mirheo::ExchangePVSFluxPlanePlugin::setup (C++ function)
mirheo::Exchanger (C++ class)
mirheo::Exchanger::addExchangeEntity (C++ function)
mirheo::Exchanger::combineAndUploadData (C++ function)
mirheo::Exchanger::getExchangeEntity (C++ function)
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[1]
mirheo::Exchanger::getNumExchangeEntities (C++ function)
mirheo::Exchanger::needExchange (C++ function)
mirheo::Exchanger::prepareData (C++ function)
mirheo::Exchanger::prepareSizes (C++ function)
mirheo::ExternalMagneticTorquePlugin (C++ class)
mirheo::ExternalMagneticTorquePlugin::beforeForces (C++ function)
mirheo::ExternalMagneticTorquePlugin::ExternalMagneticTorquePlugin (C++ function)
mirheo::ExternalMagneticTorquePlugin::needPostproc (C++ function)
mirheo::ExternalMagneticTorquePlugin::setup (C++ function)
mirheo::ExternalMagneticTorquePlugin::UniformMagneticFunc (C++ type)
mirheo::Field (C++ class)
mirheo::Field::Field (C++ function)
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[1]
mirheo::Field::handler (C++ function)
mirheo::Field::setup (C++ function)
mirheo::FieldDeviceHandler (C++ class)
mirheo::FieldDeviceHandler::operator() (C++ function)
mirheo::FieldFromFile (C++ class)
mirheo::FieldFromFile::FieldFromFile (C++ function)
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[1]
mirheo::FieldFromFile::setup (C++ function)
mirheo::FieldFromFunction (C++ class)
mirheo::FieldFromFunction::FieldFromFunction (C++ function)
,
[1]
mirheo::FieldFromFunction::setup (C++ function)
mirheo::FileWrapper (C++ class)
mirheo::FileWrapper::Cerr (C++ enumerator)
mirheo::FileWrapper::close (C++ function)
mirheo::FileWrapper::Cout (C++ enumerator)
mirheo::FileWrapper::Failed (C++ enumerator)
mirheo::FileWrapper::FileWrapper (C++ function)
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[1]
,
[2]
,
[3]
mirheo::FileWrapper::fread (C++ function)
mirheo::FileWrapper::get (C++ function)
mirheo::FileWrapper::open (C++ function)
,
[1]
mirheo::FileWrapper::operator= (C++ function)
mirheo::FileWrapper::SpecialStream (C++ type)
mirheo::FileWrapper::Status (C++ type)
mirheo::FileWrapper::Success (C++ enumerator)
mirheo::FilterKeepAll (C++ class)
mirheo::FilterKeepAll::inWhiteList (C++ function)
mirheo::FilterKeepAll::setPrerequisites (C++ function)
mirheo::FilterKeepAll::setup (C++ function)
mirheo::FilterKeepByTypeId (C++ class)
mirheo::FilterKeepByTypeId::FilterKeepByTypeId (C++ function)
mirheo::FilterKeepByTypeId::inWhiteList (C++ function)
mirheo::FilterKeepByTypeId::setPrerequisites (C++ function)
mirheo::FilterKeepByTypeId::setup (C++ function)
mirheo::Force (C++ class)
mirheo::Force::f (C++ member)
mirheo::Force::Force (C++ function)
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[1]
,
[2]
mirheo::Force::i (C++ member)
mirheo::Force::toReal4 (C++ function)
mirheo::ForceAccumulator (C++ class)
mirheo::ForceAccumulator::add (C++ function)
mirheo::ForceAccumulator::atomicAddToDst (C++ function)
mirheo::ForceAccumulator::atomicAddToSrc (C++ function)
mirheo::ForceAccumulator::ForceAccumulator (C++ function)
mirheo::ForceAccumulator::get (C++ function)
mirheo::ForceSaverPlugin (C++ class)
mirheo::ForceSaverPlugin::beforeIntegration (C++ function)
mirheo::ForceSaverPlugin::ForceSaverPlugin (C++ function)
mirheo::ForceSaverPlugin::needPostproc (C++ function)
mirheo::ForceSaverPlugin::setup (C++ function)
mirheo::ForceStress (C++ class)
mirheo::ForceStress::force (C++ member)
mirheo::ForceStress::stress (C++ member)
mirheo::ForceStressAccumulator (C++ class)
mirheo::ForceStressAccumulator::add (C++ function)
mirheo::ForceStressAccumulator::atomicAddToDst (C++ function)
mirheo::ForceStressAccumulator::atomicAddToSrc (C++ function)
mirheo::ForceStressAccumulator::ForceStressAccumulator (C++ function)
mirheo::ForceStressAccumulator::get (C++ function)
mirheo::ForcingTermConstDP (C++ class)
mirheo::ForcingTermConstDP::ForcingTermConstDP (C++ function)
mirheo::ForcingTermConstDP::operator() (C++ function)
mirheo::ForcingTermConstDP::setup (C++ function)
mirheo::ForcingTermNone (C++ class)
mirheo::ForcingTermNone::operator() (C++ function)
mirheo::ForcingTermNone::setup (C++ function)
mirheo::ForcingTermPeriodicPoiseuille (C++ class)
mirheo::ForcingTermPeriodicPoiseuille::Direction (C++ type)
mirheo::ForcingTermPeriodicPoiseuille::ForcingTermPeriodicPoiseuille (C++ function)
mirheo::ForcingTermPeriodicPoiseuille::operator() (C++ function)
mirheo::ForcingTermPeriodicPoiseuille::setup (C++ function)
mirheo::ForcingTermPeriodicPoiseuille::x (C++ enumerator)
mirheo::ForcingTermPeriodicPoiseuille::y (C++ enumerator)
mirheo::ForcingTermPeriodicPoiseuille::z (C++ enumerator)
mirheo::FromArrayIC (C++ class)
mirheo::FromArrayIC::exec (C++ function)
mirheo::FromArrayIC::FromArrayIC (C++ function)
mirheo::GenericPacker (C++ class)
mirheo::GenericPacker::getSizeBytes (C++ function)
mirheo::GenericPacker::handler (C++ function)
mirheo::GenericPacker::updateChannels (C++ function)
mirheo::GenericPackerHandler (C++ class)
mirheo::GenericPackerHandler::alignment (C++ member)
mirheo::GenericPackerHandler::copyTo (C++ function)
mirheo::GenericPackerHandler::getSizeBytes (C++ function)
mirheo::GenericPackerHandler::pack (C++ function)
mirheo::GenericPackerHandler::packShift (C++ function)
mirheo::GenericPackerHandler::unpack (C++ function)
mirheo::GenericPackerHandler::unpackAtomicAddNonZero (C++ function)
mirheo::GenericPackerHandler::unpackShift (C++ function)
mirheo::getBaseName (C++ function)
mirheo::getParentPath (C++ function)
mirheo::getTimeStamp (C++ function)
mirheo::GPUcontainer (C++ class)
mirheo::GPUcontainer::clearDevice (C++ function)
mirheo::GPUcontainer::datatype_size (C++ function)
mirheo::GPUcontainer::genericDevPtr (C++ function)
mirheo::GPUcontainer::produce (C++ function)
mirheo::GPUcontainer::resize (C++ function)
mirheo::GPUcontainer::resize_anew (C++ function)
mirheo::GPUcontainer::size (C++ function)
mirheo::HostBuffer (C++ class)
mirheo::HostBuffer::begin (C++ function)
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[1]
mirheo::HostBuffer::clear (C++ function)
mirheo::HostBuffer::copy (C++ function)
,
[1]
mirheo::HostBuffer::data (C++ function)
mirheo::HostBuffer::datatype_size (C++ function)
mirheo::HostBuffer::end (C++ function)
,
[1]
mirheo::HostBuffer::genericCopy (C++ function)
mirheo::HostBuffer::HostBuffer (C++ function)
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[1]
,
[2]
mirheo::HostBuffer::hostPtr (C++ function)
mirheo::HostBuffer::operator= (C++ function)
,
[1]
mirheo::HostBuffer::operator[] (C++ function)
,
[1]
mirheo::HostBuffer::resize (C++ function)
mirheo::HostBuffer::resize_anew (C++ function)
mirheo::HostBuffer::size (C++ function)
mirheo::ImposeProfilePlugin (C++ class)
mirheo::ImposeProfilePlugin::afterIntegration (C++ function)
mirheo::ImposeProfilePlugin::ImposeProfilePlugin (C++ function)
mirheo::ImposeProfilePlugin::needPostproc (C++ function)
mirheo::ImposeProfilePlugin::setup (C++ function)
mirheo::ImposeVelocityPlugin (C++ class)
mirheo::ImposeVelocityPlugin::afterIntegration (C++ function)
mirheo::ImposeVelocityPlugin::ImposeVelocityPlugin (C++ function)
mirheo::ImposeVelocityPlugin::needPostproc (C++ function)
mirheo::ImposeVelocityPlugin::setTargetVelocity (C++ function)
mirheo::ImposeVelocityPlugin::setup (C++ function)
mirheo::InitialConditions (C++ class)
mirheo::InitialConditions::exec (C++ function)
mirheo::Integrator (C++ class)
mirheo::Integrator::execute (C++ function)
mirheo::Integrator::Integrator (C++ function)
mirheo::Integrator::setPrerequisites (C++ function)
mirheo::IntegratorConstOmega (C++ class)
mirheo::IntegratorConstOmega::execute (C++ function)
mirheo::IntegratorConstOmega::IntegratorConstOmega (C++ function)
mirheo::IntegratorMinimize (C++ class)
mirheo::IntegratorMinimize::execute (C++ function)
mirheo::IntegratorMinimize::IntegratorMinimize (C++ function)
mirheo::IntegratorOscillate (C++ class)
mirheo::IntegratorOscillate::execute (C++ function)
mirheo::IntegratorOscillate::IntegratorOscillate (C++ function)
mirheo::IntegratorSubStep (C++ class)
mirheo::IntegratorSubStep::execute (C++ function)
mirheo::IntegratorSubStep::IntegratorSubStep (C++ function)
mirheo::IntegratorSubStep::setPrerequisites (C++ function)
mirheo::IntegratorSubStepShardlowSweep (C++ class)
mirheo::IntegratorSubStepShardlowSweep::execute (C++ function)
mirheo::IntegratorSubStepShardlowSweep::IntegratorSubStepShardlowSweep (C++ function)
mirheo::IntegratorSubStepShardlowSweep::setPrerequisites (C++ function)
mirheo::IntegratorTranslate (C++ class)
mirheo::IntegratorTranslate::execute (C++ function)
mirheo::IntegratorTranslate::IntegratorTranslate (C++ function)
mirheo::IntegratorVV (C++ class)
mirheo::IntegratorVV::execute (C++ function)
mirheo::IntegratorVV::IntegratorVV (C++ function)
mirheo::IntegratorVVRigid (C++ class)
mirheo::IntegratorVVRigid::execute (C++ function)
mirheo::IntegratorVVRigid::IntegratorVVRigid (C++ function)
mirheo::IntegratorVVRigid::setPrerequisites (C++ function)
mirheo::Interaction (C++ class)
mirheo::Interaction::ActivePredicate (C++ type)
mirheo::Interaction::alwaysActive (C++ member)
mirheo::Interaction::Final (C++ enumerator)
mirheo::Interaction::getCutoffRadius (C++ function)
mirheo::Interaction::getInputChannels (C++ function)
mirheo::Interaction::getOutputChannels (C++ function)
mirheo::Interaction::getStage (C++ function)
mirheo::Interaction::halo (C++ function)
mirheo::Interaction::Interaction (C++ function)
mirheo::Interaction::InteractionChannel (C++ class)
mirheo::Interaction::InteractionChannel::active (C++ member)
mirheo::Interaction::InteractionChannel::name (C++ member)
mirheo::Interaction::Intermediate (C++ enumerator)
mirheo::Interaction::isSelfObjectInteraction (C++ function)
mirheo::Interaction::local (C++ function)
mirheo::Interaction::setPrerequisites (C++ function)
mirheo::Interaction::Stage (C++ type)
mirheo::isTimeEvery (C++ function)
mirheo::joinPaths (C++ function)
mirheo::LocalObjectVector (C++ class)
mirheo::LocalObjectVector::computeGlobalIds (C++ function)
mirheo::LocalObjectVector::dataPerObject (C++ member)
mirheo::LocalObjectVector::getMeshForces (C++ function)
mirheo::LocalObjectVector::getMeshVertices (C++ function)
mirheo::LocalObjectVector::getNumObjects (C++ function)
mirheo::LocalObjectVector::getObjectSize (C++ function)
mirheo::LocalObjectVector::getOldMeshVertices (C++ function)
mirheo::LocalObjectVector::LocalObjectVector (C++ function)
mirheo::LocalObjectVector::resize (C++ function)
mirheo::LocalObjectVector::resize_anew (C++ function)
mirheo::LocalParticleVector (C++ class)
mirheo::LocalParticleVector::computeGlobalIds (C++ function)
mirheo::LocalParticleVector::dataPerParticle (C++ member)
mirheo::LocalParticleVector::forces (C++ function)
mirheo::LocalParticleVector::LocalParticleVector (C++ function)
mirheo::LocalParticleVector::parent (C++ function)
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[1]
mirheo::LocalParticleVector::positions (C++ function)
mirheo::LocalParticleVector::resize (C++ function)
mirheo::LocalParticleVector::resize_anew (C++ function)
mirheo::LocalParticleVector::size (C++ function)
mirheo::LocalParticleVector::velocities (C++ function)
mirheo::LocalRigidObjectVector (C++ class)
mirheo::LocalRigidObjectVector::clearRigidForces (C++ function)
mirheo::LocalRigidObjectVector::getMeshForces (C++ function)
mirheo::LocalRigidObjectVector::getMeshVertices (C++ function)
mirheo::LocalRigidObjectVector::getOldMeshVertices (C++ function)
mirheo::LocalRigidObjectVector::LocalRigidObjectVector (C++ function)
mirheo::LocalRodVector (C++ class)
mirheo::LocalRodVector::dataPerBisegment (C++ member)
mirheo::LocalRodVector::getNumSegmentsPerRod (C++ function)
mirheo::LocalRodVector::LocalRodVector (C++ function)
mirheo::LocalRodVector::resize (C++ function)
mirheo::LocalRodVector::resize_anew (C++ function)
mirheo::Logger (C++ class)
mirheo::Logger::_CUDA_Check (C++ function)
mirheo::Logger::_CUDA_die (C++ function)
mirheo::Logger::_die (C++ function)
mirheo::Logger::_MPI_Check (C++ function)
mirheo::Logger::_MPI_die (C++ function)
mirheo::Logger::getDebugLvl (C++ function)
mirheo::Logger::init (C++ function)
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[1]
mirheo::Logger::log (C++ function)
mirheo::Logger::Logger (C++ function)
mirheo::Logger::setDebugLvl (C++ function)
mirheo::MagneticDipoleInteractionsPlugin (C++ class)
mirheo::MagneticDipoleInteractionsPlugin::beforeCellLists (C++ function)
mirheo::MagneticDipoleInteractionsPlugin::beforeForces (C++ function)
mirheo::MagneticDipoleInteractionsPlugin::MagneticDipoleInteractionsPlugin (C++ function)
mirheo::MagneticDipoleInteractionsPlugin::needPostproc (C++ function)
mirheo::MagneticDipoleInteractionsPlugin::setup (C++ function)
mirheo::makePath (C++ function)
mirheo::marching_cubes::computeTriangles (C++ function)
mirheo::marching_cubes::Triangle (C++ class)
mirheo::marching_cubes::Triangle::a (C++ member)
mirheo::marching_cubes::Triangle::b (C++ member)
mirheo::marching_cubes::Triangle::c (C++ member)
mirheo::MembraneIC (C++ class)
mirheo::MembraneIC::exec (C++ function)
mirheo::MembraneIC::MembraneIC (C++ function)
mirheo::MembraneInteraction (C++ class)
mirheo::MembraneInteraction::checkpoint (C++ function)
mirheo::MembraneInteraction::local (C++ function)
mirheo::MembraneInteraction::MembraneInteraction (C++ function)
mirheo::MembraneInteraction::restart (C++ function)
mirheo::MembraneInteraction::setPrerequisites (C++ function)
mirheo::MembraneMesh (C++ class)
mirheo::MembraneMesh::getAdjacents (C++ function)
mirheo::MembraneMesh::getDegrees (C++ function)
mirheo::MembraneMesh::MembraneMesh (C++ function)
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[1]
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[2]
,
[3]
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[4]
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[5]
mirheo::MembraneMesh::operator= (C++ function)
mirheo::MembraneMeshView (C++ class)
mirheo::MembraneMeshView::adjacent (C++ member)
mirheo::MembraneMeshView::degrees (C++ member)
mirheo::MembraneMeshView::initialAreas (C++ member)
mirheo::MembraneMeshView::initialDotProducts (C++ member)
mirheo::MembraneMeshView::initialLengths (C++ member)
mirheo::MembraneMeshView::maxDegree (C++ member)
mirheo::MembraneMeshView::MembraneMeshView (C++ function)
mirheo::MembraneVector (C++ class)
mirheo::MembraneVector::MembraneVector (C++ function)
mirheo::MembraneWithTypeIdsIC (C++ class)
mirheo::MembraneWithTypeIdsIC::exec (C++ function)
mirheo::MembraneWithTypeIdsIC::MembraneWithTypeIdsIC (C++ function)
mirheo::Mesh (C++ class)
mirheo::Mesh::getFaces (C++ function)
mirheo::Mesh::getMaxDegree (C++ function)
mirheo::Mesh::getNtriangles (C++ function)
mirheo::Mesh::getNvertices (C++ function)
mirheo::Mesh::getVertices (C++ function)
mirheo::Mesh::Mesh (C++ function)
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[1]
,
[2]
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[3]
,
[4]
mirheo::Mesh::operator= (C++ function)
mirheo::MeshBelongingChecker (C++ class)
mirheo::MeshDistinctEdgeSets (C++ class)
mirheo::MeshDistinctEdgeSets::edgeSet (C++ function)
mirheo::MeshDistinctEdgeSets::MeshDistinctEdgeSets (C++ function)
mirheo::MeshDistinctEdgeSets::numColors (C++ function)
mirheo::MeshDumper (C++ class)
mirheo::MeshDumper::deserialize (C++ function)
mirheo::MeshDumper::MeshDumper (C++ function)
mirheo::MeshDumper::setup (C++ function)
mirheo::MeshPlugin (C++ class)
mirheo::MeshPlugin::beforeForces (C++ function)
mirheo::MeshPlugin::MeshPlugin (C++ function)
mirheo::MeshPlugin::needPostproc (C++ function)
mirheo::MeshPlugin::serializeAndSend (C++ function)
mirheo::MeshPlugin::setup (C++ function)
mirheo::MeshView (C++ class)
mirheo::MeshView::MeshView (C++ function)
mirheo::MeshView::ntriangles (C++ member)
mirheo::MeshView::nvertices (C++ member)
mirheo::MeshView::triangles (C++ member)
mirheo::Mirheo (C++ class)
mirheo::Mirheo::applyObjectBelongingChecker (C++ function)
mirheo::Mirheo::computeVolumeInsideWalls (C++ function)
mirheo::Mirheo::deregisterIntegrator (C++ function)
mirheo::Mirheo::deregisterPlugins (C++ function)
mirheo::Mirheo::dumpDependencyGraphToGraphML (C++ function)
mirheo::Mirheo::dumpWalls2XDMF (C++ function)
mirheo::Mirheo::getMirState (C++ function)
mirheo::Mirheo::getSimulation (C++ function)
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[1]
mirheo::Mirheo::getState (C++ function)
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[1]
mirheo::Mirheo::getWorldComm (C++ function)
mirheo::Mirheo::isComputeTask (C++ function)
mirheo::Mirheo::isMasterTask (C++ function)
mirheo::Mirheo::isPostprocessMasterTask (C++ function)
mirheo::Mirheo::isSimulationMasterTask (C++ function)
mirheo::Mirheo::logCompileOptions (C++ function)
mirheo::Mirheo::makeFrozenRigidParticles (C++ function)
mirheo::Mirheo::makeFrozenWallParticles (C++ function)
mirheo::Mirheo::Mirheo (C++ function)
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[1]
mirheo::Mirheo::registerBouncer (C++ function)
mirheo::Mirheo::registerIntegrator (C++ function)
mirheo::Mirheo::registerInteraction (C++ function)
mirheo::Mirheo::registerObjectBelongingChecker (C++ function)
mirheo::Mirheo::registerParticleVector (C++ function)
mirheo::Mirheo::registerPlugins (C++ function)
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[1]
mirheo::Mirheo::registerWall (C++ function)
mirheo::Mirheo::restart (C++ function)
mirheo::Mirheo::run (C++ function)
mirheo::Mirheo::setBouncer (C++ function)
mirheo::Mirheo::setIntegrator (C++ function)
mirheo::Mirheo::setInteraction (C++ function)
mirheo::Mirheo::setWallBounce (C++ function)
mirheo::Mirheo::startProfiler (C++ function)
mirheo::Mirheo::stopProfiler (C++ function)
mirheo::MirObject (C++ class)
mirheo::MirObject::checkpoint (C++ function)
mirheo::MirObject::createCheckpointName (C++ function)
mirheo::MirObject::createCheckpointNameWithId (C++ function)
mirheo::MirObject::createCheckpointSymlink (C++ function)
mirheo::MirObject::getCName (C++ function)
mirheo::MirObject::getName (C++ function)
mirheo::MirObject::MirObject (C++ function)
mirheo::MirObject::restart (C++ function)
mirheo::MirSimulationObject (C++ class)
mirheo::MirSimulationObject::getState (C++ function)
mirheo::MirSimulationObject::MirSimulationObject (C++ function)
mirheo::MirSimulationObject::setState (C++ function)
mirheo::MirState (C++ class)
mirheo::MirState::checkpoint (C++ function)
mirheo::MirState::currentStep (C++ member)
mirheo::MirState::currentTime (C++ member)
mirheo::MirState::domain (C++ member)
mirheo::MirState::getDt (C++ function)
mirheo::MirState::InvalidDt (C++ member)
mirheo::MirState::MirState (C++ function)
mirheo::MirState::restart (C++ function)
mirheo::MirState::setDt (C++ function)
mirheo::MirState::StepType (C++ type)
mirheo::MirState::TimeType (C++ type)
mirheo::MPIExchangeEngine (C++ class)
mirheo::MPIExchangeEngine::finalize (C++ function)
mirheo::MPIExchangeEngine::init (C++ function)
mirheo::MPIExchangeEngine::MPIExchangeEngine (C++ function)
mirheo::MsdDumper (C++ class)
mirheo::MsdDumper::deserialize (C++ function)
mirheo::MsdDumper::handshake (C++ function)
mirheo::MsdDumper::MsdDumper (C++ function)
mirheo::MsdDumper::setup (C++ function)
mirheo::MsdPlugin (C++ class)
mirheo::MsdPlugin::afterIntegration (C++ function)
mirheo::MsdPlugin::handshake (C++ function)
mirheo::MsdPlugin::MsdPlugin (C++ function)
mirheo::MsdPlugin::needPostproc (C++ function)
mirheo::MsdPlugin::serializeAndSend (C++ function)
mirheo::MsdPlugin::setup (C++ function)
mirheo::ObjectBelongingChecker (C++ class)
mirheo::ObjectBelongingChecker::checkInner (C++ function)
mirheo::ObjectBelongingChecker::getChannelsToBeExchanged (C++ function)
mirheo::ObjectBelongingChecker::getObjectVector (C++ function)
mirheo::ObjectBelongingChecker::ObjectBelongingChecker (C++ function)
mirheo::ObjectBelongingChecker::setup (C++ function)
mirheo::ObjectBelongingChecker::splitByBelonging (C++ function)
mirheo::ObjectBindingInteraction (C++ class)
mirheo::ObjectBindingInteraction::halo (C++ function)
mirheo::ObjectBindingInteraction::local (C++ function)
mirheo::ObjectBindingInteraction::ObjectBindingInteraction (C++ function)
mirheo::ObjectExtraExchanger (C++ class)
mirheo::ObjectExtraExchanger::attach (C++ function)
mirheo::ObjectExtraExchanger::ObjectExtraExchanger (C++ function)
mirheo::ObjectHaloExchanger (C++ class)
mirheo::ObjectHaloExchanger::attach (C++ function)
mirheo::ObjectHaloExchanger::getMap (C++ function)
mirheo::ObjectHaloExchanger::getRecvOffsets (C++ function)
mirheo::ObjectHaloExchanger::getSendOffsets (C++ function)
mirheo::ObjectHaloExchanger::ObjectHaloExchanger (C++ function)
mirheo::ObjectPacker (C++ class)
mirheo::ObjectPacker::getSizeBytes (C++ function)
mirheo::ObjectPacker::handler (C++ function)
mirheo::ObjectPacker::ObjectPacker (C++ function)
mirheo::ObjectPacker::update (C++ function)
mirheo::ObjectPackerHandler (C++ class)
mirheo::ObjectPackerHandler::blockCopyParticlesTo (C++ function)
mirheo::ObjectPackerHandler::blockCopyTo (C++ function)
mirheo::ObjectPackerHandler::blockPack (C++ function)
mirheo::ObjectPackerHandler::blockPackShift (C++ function)
mirheo::ObjectPackerHandler::blockUnpack (C++ function)
mirheo::ObjectPackerHandler::blockUnpackAddNonZero (C++ function)
mirheo::ObjectPackerHandler::blockUnpackShift (C++ function)
mirheo::ObjectPackerHandler::getSizeBytes (C++ function)
mirheo::ObjectPackerHandler::objects (C++ member)
mirheo::ObjectPackerHandler::objSize (C++ member)
mirheo::ObjectRedistributor (C++ class)
mirheo::ObjectRedistributor::attach (C++ function)
mirheo::ObjectRedistributor::ObjectRedistributor (C++ function)
mirheo::ObjectReverseExchanger (C++ class)
mirheo::ObjectReverseExchanger::attach (C++ function)
mirheo::ObjectReverseExchanger::ObjectReverseExchanger (C++ function)
mirheo::ObjectRodBindingInteraction (C++ class)
mirheo::ObjectRodBindingInteraction::halo (C++ function)
mirheo::ObjectRodBindingInteraction::local (C++ function)
mirheo::ObjectRodBindingInteraction::ObjectRodBindingInteraction (C++ function)
mirheo::ObjectRodBindingInteraction::setPrerequisites (C++ function)
mirheo::ObjectVector (C++ class)
mirheo::ObjectVector::checkpoint (C++ function)
mirheo::ObjectVector::findExtentAndCOM (C++ function)
mirheo::ObjectVector::get (C++ function)
mirheo::ObjectVector::getObjectSize (C++ function)
mirheo::ObjectVector::halo (C++ function)
mirheo::ObjectVector::local (C++ function)
mirheo::ObjectVector::mesh (C++ member)
mirheo::ObjectVector::ObjectVector (C++ function)
mirheo::ObjectVector::requireDataPerObject (C++ function)
mirheo::ObjectVector::restart (C++ function)
mirheo::ObjectVectorBelongingChecker (C++ class)
mirheo::ObjectVectorBelongingChecker::checkInner (C++ function)
mirheo::ObjectVectorBelongingChecker::getChannelsToBeExchanged (C++ function)
mirheo::ObjectVectorBelongingChecker::getObjectVector (C++ function)
mirheo::ObjectVectorBelongingChecker::ObjectVectorBelongingChecker (C++ function)
mirheo::ObjectVectorBelongingChecker::setup (C++ function)
mirheo::ObjectVectorBelongingChecker::splitByBelonging (C++ function)
mirheo::ObjStatsDumper (C++ class)
mirheo::ObjStatsDumper::checkpoint (C++ function)
mirheo::ObjStatsDumper::deserialize (C++ function)
mirheo::ObjStatsDumper::handshake (C++ function)
mirheo::ObjStatsDumper::ObjStatsDumper (C++ function)
mirheo::ObjStatsDumper::restart (C++ function)
mirheo::ObjStatsDumper::setup (C++ function)
mirheo::ObjStatsPlugin (C++ class)
mirheo::ObjStatsPlugin::afterIntegration (C++ function)
mirheo::ObjStatsPlugin::handshake (C++ function)
mirheo::ObjStatsPlugin::needPostproc (C++ function)
mirheo::ObjStatsPlugin::ObjStatsPlugin (C++ function)
mirheo::ObjStatsPlugin::serializeAndSend (C++ function)
mirheo::ObjStatsPlugin::setup (C++ function)
mirheo::OutletPlugin (C++ class)
mirheo::OutletPlugin::needPostproc (C++ function)
mirheo::OutletPlugin::OutletPlugin (C++ function)
mirheo::OutletPlugin::setup (C++ function)
mirheo::OVview (C++ class)
mirheo::OVview::comAndExtents (C++ member)
mirheo::OVview::ids (C++ member)
mirheo::OVview::invObjMass (C++ member)
mirheo::OVview::LPVType (C++ type)
mirheo::OVview::nObjects (C++ member)
mirheo::OVview::objMass (C++ member)
mirheo::OVview::objSize (C++ member)
mirheo::OVview::OVview (C++ function)
mirheo::OVview::PVType (C++ type)
mirheo::OVviewWithAreaVolume (C++ class)
mirheo::OVviewWithAreaVolume::area_volumes (C++ member)
mirheo::OVviewWithAreaVolume::OVviewWithAreaVolume (C++ function)
mirheo::OVviewWithJuelicherQuants (C++ class)
mirheo::OVviewWithJuelicherQuants::lenThetaTot (C++ member)
mirheo::OVviewWithJuelicherQuants::OVviewWithJuelicherQuants (C++ function)
mirheo::OVviewWithJuelicherQuants::vertexAreas (C++ member)
mirheo::OVviewWithJuelicherQuants::vertexMeanCurvatures (C++ member)
mirheo::OVviewWithNewOldVertices (C++ class)
mirheo::OVviewWithNewOldVertices::nvertices (C++ member)
mirheo::OVviewWithNewOldVertices::old_vertices (C++ member)
mirheo::OVviewWithNewOldVertices::OVviewWithNewOldVertices (C++ function)
mirheo::OVviewWithNewOldVertices::vertexForces (C++ member)
mirheo::OVviewWithNewOldVertices::vertices (C++ member)
mirheo::PairwiseDensity (C++ class)
mirheo::PairwiseDensity::getZeroedAccumulator (C++ function)
mirheo::PairwiseDensity::handler (C++ function)
mirheo::PairwiseDensity::operator() (C++ function)
mirheo::PairwiseDensity::PairwiseDensity (C++ function)
,
[1]
mirheo::PairwiseDPD (C++ class)
mirheo::PairwiseDPD::getTypeName (C++ function)
mirheo::PairwiseDPD::handler (C++ function)
mirheo::PairwiseDPD::HandlerType (C++ type)
mirheo::PairwiseDPD::PairwiseDPD (C++ function)
,
[1]
mirheo::PairwiseDPD::ParamsType (C++ type)
mirheo::PairwiseDPD::readState (C++ function)
mirheo::PairwiseDPD::setup (C++ function)
mirheo::PairwiseDPD::writeState (C++ function)
mirheo::PairwiseDPDHandler (C++ class)
mirheo::PairwiseDPDHandler::getZeroedAccumulator (C++ function)
mirheo::PairwiseDPDHandler::operator() (C++ function)
mirheo::PairwiseDPDHandler::PairwiseDPDHandler (C++ function)
mirheo::PairwiseDPDHandler::ParticleType (C++ type)
mirheo::PairwiseDPDHandler::ViewType (C++ type)
mirheo::PairwiseInteraction (C++ class)
mirheo::PairwiseInteraction::checkpoint (C++ function)
mirheo::PairwiseInteraction::getInputChannels (C++ function)
mirheo::PairwiseInteraction::getOutputChannels (C++ function)
mirheo::PairwiseInteraction::getStage (C++ function)
mirheo::PairwiseInteraction::getTypeName (C++ function)
mirheo::PairwiseInteraction::halo (C++ function)
mirheo::PairwiseInteraction::local (C++ function)
mirheo::PairwiseInteraction::PairwiseInteraction (C++ function)
mirheo::PairwiseInteraction::restart (C++ function)
mirheo::PairwiseInteraction::setPrerequisites (C++ function)
mirheo::PairwiseInteractionWithStress (C++ class)
mirheo::PairwiseInteractionWithStress::checkpoint (C++ function)
mirheo::PairwiseInteractionWithStress::getInputChannels (C++ function)
mirheo::PairwiseInteractionWithStress::getOutputChannels (C++ function)
mirheo::PairwiseInteractionWithStress::getTypeName (C++ function)
mirheo::PairwiseInteractionWithStress::halo (C++ function)
mirheo::PairwiseInteractionWithStress::local (C++ function)
mirheo::PairwiseInteractionWithStress::PairwiseInteractionWithStress (C++ function)
mirheo::PairwiseInteractionWithStress::restart (C++ function)
mirheo::PairwiseInteractionWithStress::setPrerequisites (C++ function)
mirheo::PairwiseKernel (C++ class)
mirheo::PairwiseKernel::readState (C++ function)
mirheo::PairwiseKernel::setup (C++ function)
mirheo::PairwiseKernel::writeState (C++ function)
mirheo::PairwiseLJ (C++ class)
mirheo::PairwiseLJ::getTypeName (C++ function)
mirheo::PairwiseLJ::getZeroedAccumulator (C++ function)
mirheo::PairwiseLJ::handler (C++ function)
mirheo::PairwiseLJ::HandlerType (C++ type)
mirheo::PairwiseLJ::operator() (C++ function)
mirheo::PairwiseLJ::PairwiseLJ (C++ function)
,
[1]
mirheo::PairwiseLJ::ParamsType (C++ type)
mirheo::PairwiseLJ::ParticleType (C++ type)
mirheo::PairwiseLJ::ViewType (C++ type)
mirheo::PairwiseMDPD (C++ class)
mirheo::PairwiseMDPD::getTypeName (C++ function)
mirheo::PairwiseMDPD::handler (C++ function)
mirheo::PairwiseMDPD::HandlerType (C++ type)
mirheo::PairwiseMDPD::PairwiseMDPD (C++ function)
,
[1]
mirheo::PairwiseMDPD::ParamsType (C++ type)
mirheo::PairwiseMDPD::readState (C++ function)
mirheo::PairwiseMDPD::setup (C++ function)
mirheo::PairwiseMDPD::writeState (C++ function)
mirheo::PairwiseMDPDHandler (C++ class)
mirheo::PairwiseMDPDHandler::getZeroedAccumulator (C++ function)
mirheo::PairwiseMDPDHandler::operator() (C++ function)
mirheo::PairwiseMDPDHandler::PairwiseMDPDHandler (C++ function)
mirheo::PairwiseMDPDHandler::ParticleType (C++ type)
mirheo::PairwiseMDPDHandler::ViewType (C++ type)
mirheo::PairwiseMorse (C++ class)
mirheo::PairwiseMorse::getTypeName (C++ function)
mirheo::PairwiseMorse::getZeroedAccumulator (C++ function)
mirheo::PairwiseMorse::handler (C++ function)
mirheo::PairwiseMorse::operator() (C++ function)
mirheo::PairwiseMorse::PairwiseMorse (C++ function)
,
[1]
mirheo::PairwiseMorse::setup (C++ function)
mirheo::PairwiseNorandomDPD (C++ class)
mirheo::PairwiseNorandomDPD::getTypeName (C++ function)
mirheo::PairwiseNorandomDPD::getZeroedAccumulator (C++ function)
mirheo::PairwiseNorandomDPD::handler (C++ function)
mirheo::PairwiseNorandomDPD::HandlerType (C++ type)
mirheo::PairwiseNorandomDPD::operator() (C++ function)
mirheo::PairwiseNorandomDPD::PairwiseNorandomDPD (C++ function)
,
[1]
mirheo::PairwiseNorandomDPD::ParamsType (C++ type)
mirheo::PairwiseNorandomDPD::ParticleType (C++ type)
mirheo::PairwiseNorandomDPD::setup (C++ function)
mirheo::PairwiseNorandomDPD::ViewType (C++ type)
mirheo::PairwiseRepulsiveLJ (C++ class)
mirheo::PairwiseRepulsiveLJ::handler (C++ function)
mirheo::PairwiseRepulsiveLJ::PairwiseRepulsiveLJ (C++ function)
,
[1]
mirheo::PairwiseRepulsiveLJ::setup (C++ function)
mirheo::PairwiseSDPD (C++ class)
mirheo::PairwiseSDPD::handler (C++ function)
mirheo::PairwiseSDPD::PairwiseSDPD (C++ function)
,
[1]
mirheo::PairwiseSDPD::readState (C++ function)
mirheo::PairwiseSDPD::setup (C++ function)
mirheo::PairwiseSDPD::writeState (C++ function)
mirheo::PairwiseSDPDHandler (C++ class)
mirheo::PairwiseSDPDHandler::getZeroedAccumulator (C++ function)
mirheo::PairwiseSDPDHandler::operator() (C++ function)
mirheo::PairwiseSDPDHandler::PairwiseSDPDHandler (C++ function)
mirheo::PairwiseStressWrapper (C++ class)
mirheo::PairwiseStressWrapper::handler (C++ function)
mirheo::PairwiseStressWrapper::PairwiseStressWrapper (C++ function)
,
[1]
mirheo::PairwiseStressWrapper::setup (C++ function)
mirheo::PairwiseStressWrapperHandler (C++ class)
mirheo::PairwiseStressWrapperHandler::getZeroedAccumulator (C++ function)
mirheo::PairwiseStressWrapperHandler::operator() (C++ function)
mirheo::PairwiseStressWrapperHandler::PairwiseStressWrapperHandler (C++ function)
mirheo::ParametersWrap (C++ class)
mirheo::ParametersWrap::checkAllRead (C++ function)
mirheo::ParametersWrap::exists (C++ function)
mirheo::ParametersWrap::MapParams (C++ type)
mirheo::ParametersWrap::ParametersWrap (C++ function)
mirheo::ParametersWrap::read (C++ function)
mirheo::ParametersWrap::VarParam (C++ type)
mirheo::Particle (C++ class)
mirheo::Particle::getId (C++ function)
mirheo::Particle::i1 (C++ member)
mirheo::Particle::i2 (C++ member)
mirheo::Particle::isMarked (C++ function)
mirheo::Particle::mark (C++ function)
mirheo::Particle::operator= (C++ function)
mirheo::Particle::Particle (C++ function)
,
[1]
,
[2]
mirheo::Particle::r (C++ member)
mirheo::Particle::r2Real3_int (C++ function)
mirheo::Particle::r2Real4 (C++ function)
mirheo::Particle::readCoordinate (C++ function)
mirheo::Particle::readVelocity (C++ function)
mirheo::Particle::setId (C++ function)
mirheo::Particle::u (C++ member)
mirheo::Particle::u2Real3_int (C++ function)
mirheo::Particle::u2Real4 (C++ function)
mirheo::Particle::write2Real4 (C++ function)
mirheo::ParticleChannelAveragerPlugin (C++ class)
mirheo::ParticleChannelAveragerPlugin::beforeIntegration (C++ function)
mirheo::ParticleChannelAveragerPlugin::needPostproc (C++ function)
mirheo::ParticleChannelAveragerPlugin::ParticleChannelAveragerPlugin (C++ function)
mirheo::ParticleChannelAveragerPlugin::setup (C++ function)
mirheo::ParticleChannelSaverPlugin (C++ class)
mirheo::ParticleChannelSaverPlugin::beforeIntegration (C++ function)
mirheo::ParticleChannelSaverPlugin::needPostproc (C++ function)
mirheo::ParticleChannelSaverPlugin::ParticleChannelSaverPlugin (C++ function)
mirheo::ParticleChannelSaverPlugin::setup (C++ function)
mirheo::ParticleCheckerPlugin (C++ class)
mirheo::ParticleCheckerPlugin::afterIntegration (C++ function)
mirheo::ParticleCheckerPlugin::beforeIntegration (C++ function)
mirheo::ParticleCheckerPlugin::Info (C++ type)
mirheo::ParticleCheckerPlugin::Nan (C++ enumerator)
mirheo::ParticleCheckerPlugin::needPostproc (C++ function)
mirheo::ParticleCheckerPlugin::Ok (C++ enumerator)
mirheo::ParticleCheckerPlugin::Out (C++ enumerator)
mirheo::ParticleCheckerPlugin::ParticleCheckerPlugin (C++ function)
mirheo::ParticleCheckerPlugin::setup (C++ function)
mirheo::ParticleCheckerPlugin::Status (C++ class)
mirheo::ParticleCheckerPlugin::Status::id (C++ member)
mirheo::ParticleCheckerPlugin::Status::info (C++ member)
mirheo::ParticleDisplacementPlugin (C++ class)
mirheo::ParticleDisplacementPlugin::afterIntegration (C++ function)
mirheo::ParticleDisplacementPlugin::needPostproc (C++ function)
mirheo::ParticleDisplacementPlugin::ParticleDisplacementPlugin (C++ function)
mirheo::ParticleDisplacementPlugin::setup (C++ function)
mirheo::ParticleDragPlugin (C++ class)
mirheo::ParticleDragPlugin::beforeForces (C++ function)
mirheo::ParticleDragPlugin::needPostproc (C++ function)
mirheo::ParticleDragPlugin::ParticleDragPlugin (C++ function)
mirheo::ParticleDragPlugin::setup (C++ function)
mirheo::ParticleDumperPlugin (C++ class)
mirheo::ParticleDumperPlugin::deserialize (C++ function)
mirheo::ParticleDumperPlugin::handshake (C++ function)
mirheo::ParticleDumperPlugin::ParticleDumperPlugin (C++ function)
mirheo::ParticleFetcher (C++ class)
mirheo::ParticleFetcher::getId (C++ function)
mirheo::ParticleFetcher::getPosition (C++ function)
mirheo::ParticleFetcher::ParticleFetcher (C++ function)
mirheo::ParticleFetcher::ParticleType (C++ type)
mirheo::ParticleFetcher::read (C++ function)
mirheo::ParticleFetcher::readCoordinates (C++ function)
mirheo::ParticleFetcher::readExtraData (C++ function)
mirheo::ParticleFetcher::readNoCache (C++ function)
mirheo::ParticleFetcher::ViewType (C++ type)
mirheo::ParticleFetcher::withinCutoff (C++ function)
mirheo::ParticleFetcherWithDensity (C++ class)
mirheo::ParticleFetcherWithDensity::getId (C++ function)
mirheo::ParticleFetcherWithDensity::getPosition (C++ function)
mirheo::ParticleFetcherWithDensity::ParticleFetcherWithDensity (C++ function)
mirheo::ParticleFetcherWithDensity::ParticleType (C++ type)
mirheo::ParticleFetcherWithDensity::ParticleWithDensity (C++ class)
mirheo::ParticleFetcherWithDensity::ParticleWithDensity::d (C++ member)
mirheo::ParticleFetcherWithDensity::ParticleWithDensity::p (C++ member)
mirheo::ParticleFetcherWithDensity::read (C++ function)
mirheo::ParticleFetcherWithDensity::readCoordinates (C++ function)
mirheo::ParticleFetcherWithDensity::readExtraData (C++ function)
mirheo::ParticleFetcherWithDensity::readNoCache (C++ function)
mirheo::ParticleFetcherWithDensity::ViewType (C++ type)
mirheo::ParticleFetcherWithDensity::withinCutoff (C++ function)
mirheo::ParticleFetcherWithDensityAndMass (C++ class)
mirheo::ParticleFetcherWithDensityAndMass::getId (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::getPosition (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::ParticleFetcherWithDensityAndMass (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::ParticleType (C++ type)
mirheo::ParticleFetcherWithDensityAndMass::ParticleWithDensityAndMass (C++ class)
mirheo::ParticleFetcherWithDensityAndMass::ParticleWithDensityAndMass::d (C++ member)
mirheo::ParticleFetcherWithDensityAndMass::ParticleWithDensityAndMass::m (C++ member)
mirheo::ParticleFetcherWithDensityAndMass::ParticleWithDensityAndMass::p (C++ member)
mirheo::ParticleFetcherWithDensityAndMass::read (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::readCoordinates (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::readExtraData (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::readNoCache (C++ function)
mirheo::ParticleFetcherWithDensityAndMass::ViewType (C++ type)
mirheo::ParticleFetcherWithDensityAndMass::withinCutoff (C++ function)
mirheo::ParticleHaloExchanger (C++ class)
mirheo::ParticleHaloExchanger::attach (C++ function)
mirheo::ParticleHaloExchanger::ParticleHaloExchanger (C++ function)
mirheo::ParticlePacker (C++ class)
mirheo::ParticlePacker::getSizeBytes (C++ function)
mirheo::ParticlePacker::handler (C++ function)
mirheo::ParticlePacker::ParticlePacker (C++ function)
mirheo::ParticlePacker::update (C++ function)
mirheo::ParticlePackerHandler (C++ class)
mirheo::ParticlePackerHandler::getSizeBytes (C++ function)
mirheo::ParticlePackerHandler::particles (C++ member)
mirheo::ParticleRedistributor (C++ class)
mirheo::ParticleRedistributor::attach (C++ function)
mirheo::ParticleRedistributor::ParticleRedistributor (C++ function)
mirheo::ParticleSenderPlugin (C++ class)
mirheo::ParticleSenderPlugin::beforeForces (C++ function)
mirheo::ParticleSenderPlugin::handshake (C++ function)
mirheo::ParticleSenderPlugin::needPostproc (C++ function)
mirheo::ParticleSenderPlugin::ParticleSenderPlugin (C++ function)
mirheo::ParticleSenderPlugin::pv_ (C++ member)
mirheo::ParticleSenderPlugin::pvName_ (C++ member)
mirheo::ParticleSenderPlugin::sendBuffer_ (C++ member)
mirheo::ParticleSenderPlugin::serializeAndSend (C++ function)
mirheo::ParticleSenderPlugin::setup (C++ function)
mirheo::ParticleVector (C++ class)
mirheo::ParticleVector::cellListStamp (C++ member)
mirheo::ParticleVector::checkpoint (C++ function)
mirheo::ParticleVector::get (C++ function)
mirheo::ParticleVector::getMassPerParticle (C++ function)
mirheo::ParticleVector::halo (C++ function)
,
[1]
mirheo::ParticleVector::haloValid (C++ member)
mirheo::ParticleVector::local (C++ function)
,
[1]
mirheo::ParticleVector::ParticleVector (C++ function)
mirheo::ParticleVector::redistValid (C++ member)
mirheo::ParticleVector::requireDataPerParticle (C++ function)
mirheo::ParticleVector::restart (C++ function)
mirheo::ParticleVector::setCoordinates_vector (C++ function)
mirheo::ParticleWithMeshDumperPlugin (C++ class)
mirheo::ParticleWithMeshDumperPlugin::deserialize (C++ function)
mirheo::ParticleWithMeshDumperPlugin::handshake (C++ function)
mirheo::ParticleWithMeshDumperPlugin::ParticleWithMeshDumperPlugin (C++ function)
mirheo::ParticleWithMeshSenderPlugin (C++ class)
mirheo::ParticleWithMeshSenderPlugin::handshake (C++ function)
mirheo::ParticleWithMeshSenderPlugin::ParticleWithMeshSenderPlugin (C++ function)
mirheo::ParticleWithMeshSenderPlugin::setup (C++ function)
mirheo::PidControl (C++ class)
mirheo::PidControl::PidControl (C++ function)
mirheo::PidControl::update (C++ function)
mirheo::PinnedBuffer (C++ class)
mirheo::PinnedBuffer::begin (C++ function)
,
[1]
mirheo::PinnedBuffer::clear (C++ function)
mirheo::PinnedBuffer::clearDevice (C++ function)
mirheo::PinnedBuffer::clearHost (C++ function)
mirheo::PinnedBuffer::copy (C++ function)
,
[1]
,
[2]
,
[3]
mirheo::PinnedBuffer::copyDeviceOnly (C++ function)
mirheo::PinnedBuffer::data (C++ function)
mirheo::PinnedBuffer::datatype_size (C++ function)
mirheo::PinnedBuffer::devPtr (C++ function)
mirheo::PinnedBuffer::downloadFromDevice (C++ function)
mirheo::PinnedBuffer::end (C++ function)
,
[1]
mirheo::PinnedBuffer::genericDevPtr (C++ function)
mirheo::PinnedBuffer::hostPtr (C++ function)
mirheo::PinnedBuffer::operator= (C++ function)
,
[1]
mirheo::PinnedBuffer::operator[] (C++ function)
,
[1]
mirheo::PinnedBuffer::PinnedBuffer (C++ function)
,
[1]
,
[2]
mirheo::PinnedBuffer::produce (C++ function)
mirheo::PinnedBuffer::resize (C++ function)
mirheo::PinnedBuffer::resize_anew (C++ function)
mirheo::PinnedBuffer::size (C++ function)
mirheo::PinnedBuffer::uploadToDevice (C++ function)
mirheo::PinObjectPlugin (C++ class)
mirheo::PinObjectPlugin::afterIntegration (C++ function)
mirheo::PinObjectPlugin::beforeIntegration (C++ function)
mirheo::PinObjectPlugin::handshake (C++ function)
mirheo::PinObjectPlugin::needPostproc (C++ function)
mirheo::PinObjectPlugin::PinObjectPlugin (C++ function)
mirheo::PinObjectPlugin::serializeAndSend (C++ function)
mirheo::PinObjectPlugin::setup (C++ function)
mirheo::PinObjectPlugin::Unrestricted (C++ member)
mirheo::PinRodExtremityPlugin (C++ class)
mirheo::PinRodExtremityPlugin::beforeIntegration (C++ function)
mirheo::PinRodExtremityPlugin::needPostproc (C++ function)
mirheo::PinRodExtremityPlugin::PinRodExtremityPlugin (C++ function)
mirheo::PinRodExtremityPlugin::setup (C++ function)
mirheo::PlaneOutletPlugin (C++ class)
mirheo::PlaneOutletPlugin::beforeCellLists (C++ function)
mirheo::PlaneOutletPlugin::PlaneOutletPlugin (C++ function)
mirheo::Plugin (C++ class)
mirheo::Plugin::handshake (C++ function)
mirheo::Plugin::Plugin (C++ function)
mirheo::Plugin::setTag (C++ function)
mirheo::Postprocess (C++ class)
mirheo::Postprocess::checkpoint (C++ function)
mirheo::Postprocess::deregisterPlugin (C++ function)
mirheo::Postprocess::init (C++ function)
mirheo::Postprocess::Postprocess (C++ function)
mirheo::Postprocess::registerPlugin (C++ function)
mirheo::Postprocess::restart (C++ function)
mirheo::Postprocess::run (C++ function)
mirheo::PostprocessDensityControl (C++ class)
mirheo::PostprocessDensityControl::deserialize (C++ function)
mirheo::PostprocessDensityControl::PostprocessDensityControl (C++ function)
mirheo::PostprocessPlugin (C++ class)
mirheo::PostprocessPlugin::deserialize (C++ function)
mirheo::PostprocessPlugin::PostprocessPlugin (C++ function)
mirheo::PostprocessPlugin::recv (C++ function)
mirheo::PostprocessPlugin::setup (C++ function)
mirheo::PostprocessPlugin::waitData (C++ function)
mirheo::PostprocessStats (C++ class)
mirheo::PostprocessStats::checkpoint (C++ function)
mirheo::PostprocessStats::deserialize (C++ function)
mirheo::PostprocessStats::PostprocessStats (C++ function)
mirheo::PostprocessStats::restart (C++ function)
mirheo::PostprocessVelocityControl (C++ class)
mirheo::PostprocessVelocityControl::checkpoint (C++ function)
mirheo::PostprocessVelocityControl::deserialize (C++ function)
mirheo::PostprocessVelocityControl::PostprocessVelocityControl (C++ function)
mirheo::PostprocessVelocityControl::restart (C++ function)
mirheo::PrimaryCellList (C++ class)
mirheo::PrimaryCellList::accumulateChannels (C++ function)
mirheo::PrimaryCellList::build (C++ function)
mirheo::PrimaryCellList::gatherChannels (C++ function)
mirheo::PrimaryCellList::PrimaryCellList (C++ function)
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[1]
mirheo::PVview (C++ class)
mirheo::PVview::forces (C++ member)
mirheo::PVview::invMass (C++ member)
mirheo::PVview::LPVType (C++ type)
mirheo::PVview::mass (C++ member)
mirheo::PVview::positions (C++ member)
mirheo::PVview::PVType (C++ type)
mirheo::PVview::PVview (C++ function)
mirheo::PVview::readParticle (C++ function)
mirheo::PVview::readParticleNoCache (C++ function)
mirheo::PVview::readPosition (C++ function)
,
[1]
mirheo::PVview::readPositionNoCache (C++ function)
mirheo::PVview::readVelocity (C++ function)
,
[1]
mirheo::PVview::size (C++ member)
mirheo::PVview::velocities (C++ member)
mirheo::PVview::writeParticle (C++ function)
mirheo::PVview::writePosition (C++ function)
mirheo::PVview::writeVelocity (C++ function)
mirheo::PVviewWithDensities (C++ class)
mirheo::PVviewWithDensities::densities (C++ member)
mirheo::PVviewWithDensities::PVviewWithDensities (C++ function)
mirheo::PVviewWithOldParticles (C++ class)
mirheo::PVviewWithOldParticles::oldPositions (C++ member)
mirheo::PVviewWithOldParticles::PVviewWithOldParticles (C++ function)
mirheo::PVviewWithOldParticles::readOldPosition (C++ function)
mirheo::PVviewWithStresses (C++ class)
mirheo::PVviewWithStresses::PVviewWithStresses (C++ function)
mirheo::PVviewWithStresses::stresses (C++ member)
mirheo::Quaternion (C++ class)
mirheo::Quaternion::conjugate (C++ function)
mirheo::Quaternion::createFromComponents (C++ function)
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[1]
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[2]
mirheo::Quaternion::createFromRotation (C++ function)
mirheo::Quaternion::createFromVectors (C++ function)
mirheo::Quaternion::inverseRotate (C++ function)
mirheo::Quaternion::norm (C++ function)
mirheo::Quaternion::normalize (C++ function)
mirheo::Quaternion::normalized (C++ function)
mirheo::Quaternion::operator double4 (C++ function)
mirheo::Quaternion::operator float4 (C++ function)
mirheo::Quaternion::operator Quaternion<T> (C++ function)
mirheo::Quaternion::operator*= (C++ function)
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[1]
mirheo::Quaternion::operator+= (C++ function)
mirheo::Quaternion::operator-= (C++ function)
mirheo::Quaternion::operator= (C++ function)
mirheo::Quaternion::pureVector (C++ function)
mirheo::Quaternion::Quaternion (C++ function)
mirheo::Quaternion::realPart (C++ function)
mirheo::Quaternion::rotate (C++ function)
mirheo::Quaternion::timeDerivative (C++ function)
mirheo::Quaternion::vectorPart (C++ function)
mirheo::Quaternion::w (C++ member)
mirheo::Quaternion::x (C++ member)
mirheo::Quaternion::y (C++ member)
mirheo::Quaternion::z (C++ member)
mirheo::RateOutletPlugin (C++ class)
mirheo::RateOutletPlugin::beforeCellLists (C++ function)
mirheo::RateOutletPlugin::RateOutletPlugin (C++ function)
mirheo::RdfDump (C++ class)
mirheo::RdfDump::deserialize (C++ function)
mirheo::RdfDump::RdfDump (C++ function)
mirheo::RdfDump::setup (C++ function)
mirheo::RdfPlugin (C++ class)
mirheo::RdfPlugin::afterIntegration (C++ function)
mirheo::RdfPlugin::needPostproc (C++ function)
mirheo::RdfPlugin::RdfPlugin (C++ function)
mirheo::RdfPlugin::serializeAndSend (C++ function)
mirheo::RdfPlugin::setup (C++ function)
mirheo::Real3_int (C++ class)
mirheo::Real3_int::i (C++ member)
mirheo::Real3_int::isMarked (C++ function)
mirheo::Real3_int::mark (C++ function)
mirheo::Real3_int::mark_val (C++ member)
mirheo::Real3_int::operator= (C++ function)
mirheo::Real3_int::Real3_int (C++ function)
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[1]
,
[2]
,
[3]
mirheo::Real3_int::toReal4 (C++ function)
mirheo::Real3_int::v (C++ member)
mirheo::RegionOutletPlugin (C++ class)
mirheo::RegionOutletPlugin::needPostproc (C++ function)
mirheo::RegionOutletPlugin::RegionFunc (C++ type)
mirheo::RegionOutletPlugin::RegionOutletPlugin (C++ function)
mirheo::RegionOutletPlugin::setup (C++ function)
mirheo::RestartIC (C++ class)
mirheo::RestartIC::exec (C++ function)
mirheo::RestartIC::RestartIC (C++ function)
mirheo::rigid_operations::applyRigidMotion (C++ function)
mirheo::rigid_operations::ApplyTo (C++ type)
mirheo::rigid_operations::clearRigidForcesFromMotions (C++ function)
mirheo::rigid_operations::collectRigidForces (C++ function)
mirheo::rigid_operations::PositionsAndVelocities (C++ enumerator)
mirheo::rigid_operations::PositionsOnly (C++ enumerator)
mirheo::RigidIC (C++ class)
mirheo::RigidIC::exec (C++ function)
mirheo::RigidIC::RigidIC (C++ function)
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[1]
,
[2]
mirheo::RigidObjectVector (C++ class)
mirheo::RigidObjectVector::get (C++ function)
mirheo::RigidObjectVector::getInertialTensor (C++ function)
mirheo::RigidObjectVector::halo (C++ function)
mirheo::RigidObjectVector::initialPositions (C++ member)
mirheo::RigidObjectVector::local (C++ function)
mirheo::RigidObjectVector::RigidObjectVector (C++ function)
mirheo::RigidShapedObjectVector (C++ class)
mirheo::RigidShapedObjectVector::getShape (C++ function)
mirheo::RigidShapedObjectVector::RigidShapedObjectVector (C++ function)
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[1]
mirheo::RodBelongingChecker (C++ class)
mirheo::RodBelongingChecker::RodBelongingChecker (C++ function)
mirheo::RodIC (C++ class)
mirheo::RodIC::Default (C++ member)
mirheo::RodIC::DefaultFrame (C++ member)
mirheo::RodIC::exec (C++ function)
mirheo::RodIC::MappingFunc1D (C++ type)
mirheo::RodIC::MappingFunc3D (C++ type)
mirheo::RodIC::RodIC (C++ function)
mirheo::RodInteraction (C++ class)
mirheo::RodInteraction::local (C++ function)
mirheo::RodInteraction::RodInteraction (C++ function)
mirheo::RodInteraction::setPrerequisites (C++ function)
mirheo::RodPacker (C++ class)
mirheo::RodPacker::getSizeBytes (C++ function)
mirheo::RodPacker::handler (C++ function)
mirheo::RodPacker::RodPacker (C++ function)
mirheo::RodPacker::update (C++ function)
mirheo::RodPackerHandler (C++ class)
mirheo::RodPackerHandler::bisegments (C++ member)
mirheo::RodPackerHandler::blockPack (C++ function)
mirheo::RodPackerHandler::blockPackShift (C++ function)
mirheo::RodPackerHandler::blockUnpack (C++ function)
mirheo::RodPackerHandler::blockUnpackAddNonZero (C++ function)
mirheo::RodPackerHandler::getSizeBytes (C++ function)
mirheo::RodPackerHandler::nBisegments (C++ member)
mirheo::RodVector (C++ class)
mirheo::RodVector::get (C++ function)
mirheo::RodVector::halo (C++ function)
mirheo::RodVector::local (C++ function)
mirheo::RodVector::requireDataPerBisegment (C++ function)
mirheo::RodVector::RodVector (C++ function)
mirheo::ROVview (C++ class)
mirheo::ROVview::J (C++ member)
mirheo::ROVview::J_1 (C++ member)
mirheo::ROVview::motions (C++ member)
mirheo::ROVview::ROVview (C++ function)
mirheo::ROVviewWithOldMotion (C++ class)
mirheo::ROVviewWithOldMotion::old_motions (C++ member)
mirheo::ROVviewWithOldMotion::ROVviewWithOldMotion (C++ function)
mirheo::RSOVview (C++ class)
mirheo::RSOVview::RSOVview (C++ function)
mirheo::RSOVview::shape (C++ member)
mirheo::RSOVviewWithOldMotion (C++ class)
mirheo::RSOVviewWithOldMotion::old_motions (C++ member)
mirheo::RSOVviewWithOldMotion::RSOVviewWithOldMotion (C++ function)
mirheo::RVview (C++ class)
mirheo::RVview::energies (C++ member)
mirheo::RVview::nSegments (C++ member)
mirheo::RVview::RVview (C++ function)
mirheo::RVview::states (C++ member)
mirheo::RVviewWithOldParticles (C++ class)
mirheo::RVviewWithOldParticles::oldPositions (C++ member)
mirheo::RVviewWithOldParticles::RVviewWithOldParticles (C++ function)
mirheo::SDFBasedWall (C++ class)
mirheo::SDFBasedWall::getCurrentBounceForce (C++ function)
mirheo::SDFBasedWall::sdfOnGrid (C++ function)
mirheo::SDFBasedWall::sdfPerParticle (C++ function)
mirheo::SDFBasedWall::sdfPerPosition (C++ function)
mirheo::ShapeBelongingChecker (C++ class)
mirheo::SimpleSerializer (C++ class)
mirheo::SimpleSerializer::deserialize (C++ function)
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[1]
mirheo::SimpleSerializer::serialize (C++ function)
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[1]
mirheo::SimpleSerializer::totSize (C++ function)
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[1]
,
[2]
mirheo::SimpleStationaryWall (C++ class)
mirheo::SimpleStationaryWall::attach (C++ function)
mirheo::SimpleStationaryWall::attachFrozen (C++ function)
mirheo::SimpleStationaryWall::bounce (C++ function)
mirheo::SimpleStationaryWall::check (C++ function)
mirheo::SimpleStationaryWall::detachAllCellLists (C++ function)
mirheo::SimpleStationaryWall::getChecker (C++ function)
mirheo::SimpleStationaryWall::getCurrentBounceForce (C++ function)
mirheo::SimpleStationaryWall::removeInner (C++ function)
mirheo::SimpleStationaryWall::sdfOnGrid (C++ function)
mirheo::SimpleStationaryWall::sdfPerParticle (C++ function)
mirheo::SimpleStationaryWall::sdfPerPosition (C++ function)
mirheo::SimpleStationaryWall::setPrerequisites (C++ function)
mirheo::SimpleStationaryWall::setup (C++ function)
mirheo::SimpleStationaryWall::SimpleStationaryWall (C++ function)
mirheo::Simulation (C++ class)
mirheo::Simulation::applyObjectBelongingChecker (C++ function)
mirheo::Simulation::checkpoint (C++ function)
mirheo::Simulation::deregisterIntegrator (C++ function)
mirheo::Simulation::deregisterPlugin (C++ function)
mirheo::Simulation::dumpDependencyGraphToGraphML (C++ function)
mirheo::Simulation::gelCellList (C++ function)
mirheo::Simulation::getCartComm (C++ function)
mirheo::Simulation::getCurrentDt (C++ function)
mirheo::Simulation::getCurrentTime (C++ function)
mirheo::Simulation::getMaxEffectiveCutoff (C++ function)
mirheo::Simulation::getNRanks3D (C++ function)
mirheo::Simulation::getOVbyName (C++ function)
mirheo::Simulation::getOVbyNameOrDie (C++ function)
mirheo::Simulation::getParticleVectors (C++ function)
mirheo::Simulation::getPVbyName (C++ function)
mirheo::Simulation::getPVbyNameOrDie (C++ function)
mirheo::Simulation::getRank3D (C++ function)
mirheo::Simulation::getSharedPVbyName (C++ function)
mirheo::Simulation::getWallByNameOrDie (C++ function)
mirheo::Simulation::init (C++ function)
mirheo::Simulation::notifyPostProcess (C++ function)
mirheo::Simulation::registerBouncer (C++ function)
mirheo::Simulation::registerIntegrator (C++ function)
mirheo::Simulation::registerInteraction (C++ function)
mirheo::Simulation::registerObjectBelongingChecker (C++ function)
mirheo::Simulation::registerParticleVector (C++ function)
mirheo::Simulation::registerPlugin (C++ function)
mirheo::Simulation::registerWall (C++ function)
mirheo::Simulation::restart (C++ function)
mirheo::Simulation::run (C++ function)
mirheo::Simulation::setBouncer (C++ function)
mirheo::Simulation::setIntegrator (C++ function)
mirheo::Simulation::setInteraction (C++ function)
mirheo::Simulation::setObjectBelongingChecker (C++ function)
mirheo::Simulation::setWallBounce (C++ function)
mirheo::Simulation::Simulation (C++ function)
mirheo::Simulation::startProfiler (C++ function)
mirheo::Simulation::stopProfiler (C++ function)
mirheo::SimulationPlugin (C++ class)
mirheo::SimulationPlugin::afterIntegration (C++ function)
mirheo::SimulationPlugin::beforeCellLists (C++ function)
mirheo::SimulationPlugin::beforeForces (C++ function)
mirheo::SimulationPlugin::beforeIntegration (C++ function)
mirheo::SimulationPlugin::beforeParticleDistribution (C++ function)
mirheo::SimulationPlugin::finalize (C++ function)
mirheo::SimulationPlugin::needPostproc (C++ function)
mirheo::SimulationPlugin::serializeAndSend (C++ function)
mirheo::SimulationPlugin::setup (C++ function)
mirheo::SimulationPlugin::SimulationPlugin (C++ function)
mirheo::SimulationStats (C++ class)
mirheo::SimulationStats::afterIntegration (C++ function)
mirheo::SimulationStats::needPostproc (C++ function)
mirheo::SimulationStats::serializeAndSend (C++ function)
mirheo::SimulationStats::setup (C++ function)
mirheo::SimulationStats::SimulationStats (C++ function)
mirheo::SimulationVelocityControl (C++ class)
mirheo::SimulationVelocityControl::afterIntegration (C++ function)
mirheo::SimulationVelocityControl::beforeForces (C++ function)
mirheo::SimulationVelocityControl::checkpoint (C++ function)
mirheo::SimulationVelocityControl::needPostproc (C++ function)
mirheo::SimulationVelocityControl::restart (C++ function)
mirheo::SimulationVelocityControl::serializeAndSend (C++ function)
mirheo::SimulationVelocityControl::setup (C++ function)
mirheo::SimulationVelocityControl::SimulationVelocityControl (C++ function)
mirheo::SingleNodeExchangeEngine (C++ class)
mirheo::SingleNodeExchangeEngine::finalize (C++ function)
mirheo::SingleNodeExchangeEngine::init (C++ function)
mirheo::SingleNodeExchangeEngine::SingleNodeExchangeEngine (C++ function)
mirheo::splitByDelim (C++ function)
mirheo::StationaryWallBox (C++ class)
mirheo::StationaryWallBox::handler (C++ function)
mirheo::StationaryWallBox::operator() (C++ function)
mirheo::StationaryWallBox::setup (C++ function)
mirheo::StationaryWallBox::StationaryWallBox (C++ function)
mirheo::StationaryWallCylinder (C++ class)
mirheo::StationaryWallCylinder::Direction (C++ type)
mirheo::StationaryWallCylinder::handler (C++ function)
mirheo::StationaryWallCylinder::operator() (C++ function)
mirheo::StationaryWallCylinder::setup (C++ function)
mirheo::StationaryWallCylinder::StationaryWallCylinder (C++ function)
mirheo::StationaryWallCylinder::x (C++ enumerator)
mirheo::StationaryWallCylinder::y (C++ enumerator)
mirheo::StationaryWallCylinder::z (C++ enumerator)
mirheo::StationaryWallPlane (C++ class)
mirheo::StationaryWallPlane::handler (C++ function)
mirheo::StationaryWallPlane::operator() (C++ function)
mirheo::StationaryWallPlane::setup (C++ function)
mirheo::StationaryWallPlane::StationaryWallPlane (C++ function)
mirheo::StationaryWallSDF (C++ class)
mirheo::StationaryWallSDF::handler (C++ function)
mirheo::StationaryWallSDF::setup (C++ function)
mirheo::StationaryWallSDF::StationaryWallSDF (C++ function)
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[1]
mirheo::StationaryWallSphere (C++ class)
mirheo::StationaryWallSphere::handler (C++ function)
mirheo::StationaryWallSphere::operator() (C++ function)
mirheo::StationaryWallSphere::setup (C++ function)
mirheo::StationaryWallSphere::StationaryWallSphere (C++ function)
mirheo::StepRandomGen (C++ class)
mirheo::StepRandomGen::generate (C++ function)
mirheo::StepRandomGen::StepRandomGen (C++ function)
mirheo::Stress (C++ class)
mirheo::Stress::xx (C++ member)
mirheo::Stress::xy (C++ member)
mirheo::Stress::xz (C++ member)
mirheo::Stress::yy (C++ member)
mirheo::Stress::yz (C++ member)
mirheo::Stress::zz (C++ member)
mirheo::stringToTypeDescriptor (C++ function)
mirheo::TaskScheduler (C++ class)
mirheo::TaskScheduler::addDependency (C++ function)
mirheo::TaskScheduler::addTask (C++ function)
mirheo::TaskScheduler::compile (C++ function)
mirheo::TaskScheduler::createTask (C++ function)
mirheo::TaskScheduler::dumpGraphToGraphML (C++ function)
mirheo::TaskScheduler::forceExec (C++ function)
mirheo::TaskScheduler::Function (C++ type)
mirheo::TaskScheduler::getTaskId (C++ function)
mirheo::TaskScheduler::getTaskIdOrDie (C++ function)
mirheo::TaskScheduler::invalidTaskId (C++ member)
mirheo::TaskScheduler::run (C++ function)
mirheo::TaskScheduler::setHighPriority (C++ function)
mirheo::TaskScheduler::TaskID (C++ type)
mirheo::TaskScheduler::TaskScheduler (C++ function)
mirheo::TemperaturizePlugin (C++ class)
mirheo::TemperaturizePlugin::beforeForces (C++ function)
mirheo::TemperaturizePlugin::needPostproc (C++ function)
mirheo::TemperaturizePlugin::setup (C++ function)
mirheo::TemperaturizePlugin::TemperaturizePlugin (C++ function)
mirheo::TriangleLimForce (C++ class)
mirheo::TriangleLimForce::applyLengthScalingFactor (C++ function)
mirheo::TriangleLimForce::getEquilibriumDesc (C++ function)
mirheo::TriangleLimForce::operator() (C++ function)
mirheo::TriangleLimForce::TriangleLimForce (C++ function)
mirheo::TriangleWLCForce (C++ class)
mirheo::TriangleWLCForce::applyLengthScalingFactor (C++ function)
mirheo::TriangleWLCForce::getEquilibriumDesc (C++ function)
mirheo::TriangleWLCForce::operator() (C++ function)
mirheo::TriangleWLCForce::TriangleWLCForce (C++ function)
mirheo::typeDescriptorToString (C++ function)
mirheo::UniformCartesianDumper (C++ class)
mirheo::UniformCartesianDumper::deserialize (C++ function)
mirheo::UniformCartesianDumper::getChannelOrDie (C++ function)
mirheo::UniformCartesianDumper::getLocalResolution (C++ function)
mirheo::UniformCartesianDumper::handshake (C++ function)
mirheo::UniformCartesianDumper::UniformCartesianDumper (C++ function)
mirheo::UniformFilteredIC (C++ class)
mirheo::UniformFilteredIC::exec (C++ function)
mirheo::UniformFilteredIC::UniformFilteredIC (C++ function)
mirheo::UniformIC (C++ class)
mirheo::UniformIC::exec (C++ function)
mirheo::UniformIC::UniformIC (C++ function)
mirheo::UniformSphereIC (C++ class)
mirheo::UniformSphereIC::exec (C++ function)
mirheo::UniformSphereIC::UniformSphereIC (C++ function)
mirheo::VacfDumper (C++ class)
mirheo::VacfDumper::deserialize (C++ function)
mirheo::VacfDumper::handshake (C++ function)
mirheo::VacfDumper::setup (C++ function)
mirheo::VacfDumper::VacfDumper (C++ function)
mirheo::VacfPlugin (C++ class)
mirheo::VacfPlugin::afterIntegration (C++ function)
mirheo::VacfPlugin::handshake (C++ function)
mirheo::VacfPlugin::needPostproc (C++ function)
mirheo::VacfPlugin::serializeAndSend (C++ function)
mirheo::VacfPlugin::setup (C++ function)
mirheo::VacfPlugin::VacfPlugin (C++ function)
mirheo::VelocityFieldNone (C++ class)
mirheo::VelocityFieldNone::handler (C++ function)
mirheo::VelocityFieldNone::operator() (C++ function)
mirheo::VelocityFieldNone::setup (C++ function)
mirheo::VelocityFieldOscillate (C++ class)
mirheo::VelocityFieldOscillate::handler (C++ function)
mirheo::VelocityFieldOscillate::operator() (C++ function)
mirheo::VelocityFieldOscillate::setup (C++ function)
mirheo::VelocityFieldOscillate::VelocityFieldOscillate (C++ function)
mirheo::VelocityFieldRotate (C++ class)
mirheo::VelocityFieldRotate::handler (C++ function)
mirheo::VelocityFieldRotate::operator() (C++ function)
mirheo::VelocityFieldRotate::setup (C++ function)
mirheo::VelocityFieldRotate::VelocityFieldRotate (C++ function)
mirheo::VelocityFieldTranslate (C++ class)
mirheo::VelocityFieldTranslate::handler (C++ function)
mirheo::VelocityFieldTranslate::operator() (C++ function)
mirheo::VelocityFieldTranslate::setup (C++ function)
mirheo::VelocityFieldTranslate::VelocityFieldTranslate (C++ function)
mirheo::VelocityInletPlugin (C++ class)
mirheo::VelocityInletPlugin::beforeCellLists (C++ function)
mirheo::VelocityInletPlugin::ImplicitSurfaceFunc (C++ type)
mirheo::VelocityInletPlugin::needPostproc (C++ function)
mirheo::VelocityInletPlugin::setup (C++ function)
mirheo::VelocityInletPlugin::VelocityFieldFunc (C++ type)
mirheo::VelocityInletPlugin::VelocityInletPlugin (C++ function)
mirheo::VertexFetcher (C++ class)
mirheo::VertexFetcher::fetchVertex (C++ function)
mirheo::VertexFetcher::VertexType (C++ type)
mirheo::VertexFetcher::ViewType (C++ type)
mirheo::VertexFetcherWithMeanCurvatures (C++ class)
mirheo::VertexFetcherWithMeanCurvatures::fetchVertex (C++ function)
mirheo::VertexFetcherWithMeanCurvatures::VertexType (C++ type)
mirheo::VertexFetcherWithMeanCurvatures::VertexWithMeanCurvature (C++ class)
mirheo::VertexFetcherWithMeanCurvatures::VertexWithMeanCurvature::H (C++ member)
mirheo::VertexFetcherWithMeanCurvatures::VertexWithMeanCurvature::r (C++ member)
mirheo::VertexFetcherWithMeanCurvatures::ViewType (C++ type)
mirheo::VirialPressureDumper (C++ class)
mirheo::VirialPressureDumper::deserialize (C++ function)
mirheo::VirialPressureDumper::handshake (C++ function)
mirheo::VirialPressureDumper::setup (C++ function)
mirheo::VirialPressureDumper::VirialPressureDumper (C++ function)
mirheo::VirialPressurePlugin (C++ class)
mirheo::VirialPressurePlugin::afterIntegration (C++ function)
mirheo::VirialPressurePlugin::handshake (C++ function)
mirheo::VirialPressurePlugin::needPostproc (C++ function)
mirheo::VirialPressurePlugin::serializeAndSend (C++ function)
mirheo::VirialPressurePlugin::setup (C++ function)
mirheo::VirialPressurePlugin::VirialPressurePlugin (C++ function)
mirheo::Wall (C++ class)
mirheo::Wall::attach (C++ function)
mirheo::Wall::attachFrozen (C++ function)
mirheo::Wall::bounce (C++ function)
mirheo::Wall::check (C++ function)
mirheo::Wall::detachAllCellLists (C++ function)
mirheo::Wall::removeInner (C++ function)
mirheo::Wall::setPrerequisites (C++ function)
mirheo::Wall::setup (C++ function)
mirheo::Wall::Wall (C++ function)
mirheo::WallForceCollectorPlugin (C++ class)
mirheo::WallForceCollectorPlugin::afterIntegration (C++ function)
mirheo::WallForceCollectorPlugin::needPostproc (C++ function)
mirheo::WallForceCollectorPlugin::serializeAndSend (C++ function)
mirheo::WallForceCollectorPlugin::setup (C++ function)
mirheo::WallForceCollectorPlugin::WallForceCollectorPlugin (C++ function)
mirheo::WallForceDumperPlugin (C++ class)
mirheo::WallForceDumperPlugin::deserialize (C++ function)
mirheo::WallForceDumperPlugin::WallForceDumperPlugin (C++ function)
mirheo::WallRepulsionPlugin (C++ class)
mirheo::WallRepulsionPlugin::beforeIntegration (C++ function)
mirheo::WallRepulsionPlugin::needPostproc (C++ function)
mirheo::WallRepulsionPlugin::setup (C++ function)
mirheo::WallRepulsionPlugin::WallRepulsionPlugin (C++ function)
mirheo::WallWithVelocity (C++ class)
mirheo::WallWithVelocity::attachFrozen (C++ function)
mirheo::WallWithVelocity::bounce (C++ function)
mirheo::WallWithVelocity::setup (C++ function)
mirheo::WallWithVelocity::WallWithVelocity (C++ function)
mirheo::writeXYZ (C++ function)
mirheo::XDMF (C++ type)
mirheo::XDMF::Channel (C++ class)
mirheo::XDMF::Channel::data (C++ member)
mirheo::XDMF::Channel::dataForm (C++ member)
mirheo::XDMF::Channel::DataForm (C++ type)
mirheo::XDMF::Channel::name (C++ member)
mirheo::XDMF::Channel::nComponents (C++ function)
mirheo::XDMF::Channel::needShift (C++ member)
mirheo::XDMF::Channel::numberType (C++ member)
mirheo::XDMF::Channel::Polyline (C++ class)
mirheo::XDMF::Channel::Polyline::numVertices (C++ member)
mirheo::XDMF::Channel::precision (C++ function)
mirheo::XDMF::Channel::type (C++ member)
mirheo::XDMF::dataFormToDescription (C++ function)
mirheo::XDMF::dataFormToNcomponents (C++ function)
mirheo::XDMF::dataFormToXDMFAttribute (C++ function)
mirheo::XDMF::descriptionToDataForm (C++ function)
mirheo::XDMF::Double (C++ enumerator)
mirheo::XDMF::False (C++ enumerator)
mirheo::XDMF::Float (C++ enumerator)
mirheo::XDMF::Grid (C++ class)
mirheo::XDMF::Grid::getCentering (C++ function)
mirheo::XDMF::Grid::getGridDims (C++ function)
mirheo::XDMF::Grid::readFromHDF5 (C++ function)
mirheo::XDMF::Grid::readFromXMF (C++ function)
mirheo::XDMF::Grid::splitReadAccess (C++ function)
mirheo::XDMF::Grid::writeToHDF5 (C++ function)
mirheo::XDMF::Grid::writeToXMF (C++ function)
mirheo::XDMF::GridDims (C++ class)
mirheo::XDMF::GridDims::getDims (C++ function)
mirheo::XDMF::GridDims::getGlobalSize (C++ function)
mirheo::XDMF::GridDims::getLocalSize (C++ function)
mirheo::XDMF::GridDims::getOffsets (C++ function)
mirheo::XDMF::GridDims::globalEmpty (C++ function)
mirheo::XDMF::GridDims::localEmpty (C++ function)
mirheo::XDMF::infoToNumberType (C++ function)
mirheo::XDMF::Int (C++ enumerator)
mirheo::XDMF::Int64 (C++ enumerator)
mirheo::XDMF::NeedShift (C++ type)
mirheo::XDMF::NumberType (C++ type)
mirheo::XDMF::numberTypeToHDF5type (C++ function)
mirheo::XDMF::numberTypeToPrecision (C++ function)
mirheo::XDMF::numberTypeToString (C++ function)
mirheo::XDMF::readVertexData (C++ function)
mirheo::XDMF::TriangleMeshGrid (C++ class)
mirheo::XDMF::TriangleMeshGrid::TriangleMeshGrid (C++ function)
mirheo::XDMF::TriangleMeshGrid::writeToHDF5 (C++ function)
mirheo::XDMF::True (C++ enumerator)
mirheo::XDMF::UniformGrid (C++ class)
mirheo::XDMF::UniformGrid::getCentering (C++ function)
mirheo::XDMF::UniformGrid::getGridDims (C++ function)
mirheo::XDMF::UniformGrid::readFromHDF5 (C++ function)
mirheo::XDMF::UniformGrid::readFromXMF (C++ function)
mirheo::XDMF::UniformGrid::splitReadAccess (C++ function)
mirheo::XDMF::UniformGrid::UniformGrid (C++ function)
mirheo::XDMF::UniformGrid::writeToHDF5 (C++ function)
mirheo::XDMF::UniformGrid::writeToXMF (C++ function)
mirheo::XDMF::VertexGrid (C++ class)
mirheo::XDMF::VertexGrid::getCentering (C++ function)
mirheo::XDMF::VertexGrid::getGridDims (C++ function)
mirheo::XDMF::VertexGrid::readFromHDF5 (C++ function)
mirheo::XDMF::VertexGrid::readFromXMF (C++ function)
mirheo::XDMF::VertexGrid::splitReadAccess (C++ function)
mirheo::XDMF::VertexGrid::VertexGrid (C++ function)
mirheo::XDMF::VertexGrid::writeToHDF5 (C++ function)
mirheo::XDMF::VertexGrid::writeToXMF (C++ function)
mirheo::XYZDumper (C++ class)
mirheo::XYZDumper::deserialize (C++ function)
mirheo::XYZDumper::setup (C++ function)
mirheo::XYZDumper::XYZDumper (C++ function)
mirheo::XYZPlugin (C++ class)
mirheo::XYZPlugin::beforeForces (C++ function)
mirheo::XYZPlugin::needPostproc (C++ function)
mirheo::XYZPlugin::serializeAndSend (C++ function)
mirheo::XYZPlugin::setup (C++ function)
mirheo::XYZPlugin::XYZPlugin (C++ function)
MIRHEO_TYPE_TABLE__ (C macro)
MirState (class in mmirheo)
mmirheo.BelongingCheckers (module)
mmirheo.Bouncers (module)
mmirheo.InitialConditions (module)
mmirheo.Integrators (module)
mmirheo.Interactions (module)
mmirheo.ParticleVectors (module)
mmirheo.Plugins (module)
mmirheo.Utils (module)
mmirheo.Walls (module)
MovingPlane (class in mmirheo.Walls)
O
ObjBinding (class in mmirheo.Interactions)
ObjectVector (class in mmirheo.ParticleVectors)
ObjRodBinding (class in mmirheo.Interactions)
operator* (C++ function)
,
[1]
,
[2]
operator+ (C++ function)
operator- (C++ function)
operator<< (C++ function)
,
[1]
operator>> (C++ function)
,
[1]
Oscillate (class in mmirheo.Integrators)
OscillatingPlane (class in mmirheo.Walls)
P
Pairwise (class in mmirheo.Interactions)
ParticleVector (class in mmirheo.ParticleVectors)
per_object (LocalObjectVector attribute)
per_particle (LocalObjectVector attribute)
(LocalParticleVector attribute)
PinObject (class in mmirheo.Plugins)
Plane (class in mmirheo.Walls)
PostprocessPlugin (class in mmirheo.Plugins)
R
RandomChains (class in mmirheo.InitialConditions)
registerBouncer() (Mirheo method)
registerIntegrator() (Mirheo method)
registerInteraction() (Mirheo method)
registerObjectBelongingChecker() (Mirheo method)
registerParticleVector() (Mirheo method)
registerPlugins() (Mirheo method)
registerWall() (Mirheo method)
Restart (class in mmirheo.InitialConditions)
restart() (Mirheo method)
Rigid (class in mmirheo.InitialConditions)
RigidCapsuleVector (class in mmirheo.ParticleVectors)
RigidCylinderVector (class in mmirheo.ParticleVectors)
RigidEllipsoidVector (class in mmirheo.ParticleVectors)
RigidObjectVector (class in mmirheo.ParticleVectors)
RigidVelocityVerlet (class in mmirheo.Integrators)
Rod (class in mmirheo.BelongingCheckers)
(class in mmirheo.Bouncers)
(class in mmirheo.InitialConditions)
RodForces (class in mmirheo.Interactions)
RodVector (class in mmirheo.ParticleVectors)
Rotate (class in mmirheo.Integrators)
RotatingCylinder (class in mmirheo.Walls)
run() (Mirheo method)
S
save_dependency_graph_graphml() (Mirheo method)
SDF (class in mmirheo.Walls)
setBouncer() (Mirheo method)
setCoordinates() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
setForces() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
setIntegrator() (Mirheo method)
setInteraction() (Mirheo method)
setVelocities() (ChainVector method)
(MembraneVector method)
(ObjectVector method)
(ParticleVector method)
(RigidCapsuleVector method)
(RigidCylinderVector method)
(RigidEllipsoidVector method)
(RigidObjectVector method)
(RodVector method)
setWall() (Mirheo method)
SimulationPlugin (class in mmirheo.Plugins)
Sphere (class in mmirheo.Walls)
start_profiler() (Mirheo method)
stop_profiler() (Mirheo method)
StraightChains (class in mmirheo.InitialConditions)
SubStep (class in mmirheo.Integrators)
SubStepShardlowSweep (class in mmirheo.Integrators)
swap (C++ function)
,
[1]
,
[2]
T
Translate (class in mmirheo.Integrators)
U
Uniform (class in mmirheo.InitialConditions)
UniformFiltered (class in mmirheo.InitialConditions)
UniformSphere (class in mmirheo.InitialConditions)
V
VelocityVerlet (class in mmirheo.Integrators)
VelocityVerlet_withConstForce (class in mmirheo.Integrators)
VelocityVerlet_withPeriodicForce (class in mmirheo.Integrators)
W
Wall (class in mmirheo.Walls)
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